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SCN18_30_10_14_R3_B_scaffold_989_8

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 4648..6597

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VUX8_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 647.0
  • Bit_score: 978
  • Evalue 2.40e-282
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 645.0
  • Bit_score: 1055
  • Evalue 0.0
Type VI secretion protein {ECO:0000313|EMBL:AJP47688.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 645.0
  • Bit_score: 1055
  • Evalue 0.0

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1950
ATGAGCAGTCGTGACGATGACCGTTTCCGCGTCCGCCCTGGCGCCCCCAGGAACCGTCAGCAGAAGTTCGTTTCCCAAGTGCTCAAGGAGATCAGCAAGGCGGGGGGCAAGTCGATTCACAGGTCAGGAGCACGGCCCGGCGCACGCCTCGGACGCGGGCATGTGGCGGCCCGATTCACCGGCCGCTCGCTGTCGCCCAATGCCCGGCGCGTGACCATCAAGACCCGGCTGGTGAACCTCAAGCAGGCCGGACCGCGCTCCACCACCACGCACCTGCGCTACATCGAGCGCGATGGTATTGGCCGCGACGGCGAGCCAGGCAAAGCCTACGGCCCTGTCACGGACGACGCCGACCTGGCCGCTTTCGAGGAACGCGGTCGCGAGGACCGGCACCAGTTCCGCTTCATCGTCTCGCCGGAGGACGCCGAACAACTCGACGACCTGCGCACCTATACCCGCCACCTGATGAGCCGGATGGAAGCGGACCTGGACAGCCGGCTTGACTGGGTAGCGGTCAATCACTGGAACACCGACAACCCGCACACCCACATCGTGCTGCGTGGCAAGGACGACACCGGCAAGGATTTGATCATCTCGCGCGACTATATCGCCCACGGCATGCGCGAACGCGCGGCAGAATTGGCCACCGAATGGCTGGGGCCGCGCACCGAACGGGAGATTCAGCAGAGCCTGCAACGCGAGGTCGGACAGGAGCGCTGGACGAGTCTGGACCGCCGATTGCAACGCGAATCCCGTGACGGGCTGATACGCCTCGATCCGCCTGCCGGTGATCACGCGCTCAGACAGCAGCGCGTACTGCTGATCGGGCGTCTGCAACACTTGCAGCGCATGGGCCTGGCGCACGAACAATCCATTGGCGTGTGGTCCATCCATGCCAATGCCGAGCAGGTGCTGCGAGCCATGGGTGAGCGTGGCGACATCGTGCGCACCCTGCAGCGAGCCATGAGCGGCATGAAGCGCGACCTAGTAGTATTCGAGCCCGGCGAGAACGCCAGGCCAGTGGTCGGTCGTGTGGTTGCCAAGGGCATGGCCGACGAATTGCACGACCGGGGCTACCTGGTGATCGACGGCATCGATGGCAAGGCGCATTACGTCGCGCTCAATGCCAGGACGGAACTGGAACAGTACCCCGTCGGCACCGTGGTCGAGGCGCGCGGATCAACGGATATCCGCGCTGTCGACAAAAACATCGCTACGCTGGCGGTCGATGGCCTGTACCGCCCCGACCATCACTTGGCCATGACCAAGGCCCAAGCCACGCGCGACCGCGATCCCGGCGAAGTGGTCAATGCACACATTCGCCGGCTGGAGGCCCTGCGCCGGGCGGGCATTGTGGAGCGCGTGGCCAAGAGTGTCTGGCGGGTGCCGGGGGATCTGCCCGAAAAGGGCCGGCAATACGATATCCAGCGGCTGGGCGGTGTGTCGGTGGAAGTGCGTTCGCACTTGCCGATCGAACGGCAAACGCGCGTGGTCGGAGCCACCTGGCTGGACCAGCAGTTGATCAGAGAGTCTGTCGGAATTGGCAACCAAGGTTTTGGTCGCGAGGTGCGCGAAGCGCTTCGACAGCGGTCGGATTTCCTTGTCGAACAGGGGCTGGCTGAACGCCGCGGACAACGGGTGGTGCTCGCGCGCAACCTGCTCGCGACCTTGCGCGGCCGCGACATCGAGACGGCCGCGAGGTTCATCGCCGCCGAGACCGGCTTGGCACATCGTGTCGTCGTGGATGGCGAGCGCATCACCGGCGTCTTCCGTCGCAACGTCCAGCTCGCCAGCGGCCAGTTCGCGATGCTCGATGACGGCATGGGTTTCAGCCTGGTGCCATGGAAGCCGGTGATTGAGCAGCGGTTGGGAAAAACCATGACAGCAGTCATTCGAGGAAGCAACGTGTCATGGGAGCTGGAACGGCAGCATGGGATATCAATGAAGTAA
PROTEIN sequence
Length: 650
MSSRDDDRFRVRPGAPRNRQQKFVSQVLKEISKAGGKSIHRSGARPGARLGRGHVAARFTGRSLSPNARRVTIKTRLVNLKQAGPRSTTTHLRYIERDGIGRDGEPGKAYGPVTDDADLAAFEERGREDRHQFRFIVSPEDAEQLDDLRTYTRHLMSRMEADLDSRLDWVAVNHWNTDNPHTHIVLRGKDDTGKDLIISRDYIAHGMRERAAELATEWLGPRTEREIQQSLQREVGQERWTSLDRRLQRESRDGLIRLDPPAGDHALRQQRVLLIGRLQHLQRMGLAHEQSIGVWSIHANAEQVLRAMGERGDIVRTLQRAMSGMKRDLVVFEPGENARPVVGRVVAKGMADELHDRGYLVIDGIDGKAHYVALNARTELEQYPVGTVVEARGSTDIRAVDKNIATLAVDGLYRPDHHLAMTKAQATRDRDPGEVVNAHIRRLEALRRAGIVERVAKSVWRVPGDLPEKGRQYDIQRLGGVSVEVRSHLPIERQTRVVGATWLDQQLIRESVGIGNQGFGREVREALRQRSDFLVEQGLAERRGQRVVLARNLLATLRGRDIETAARFIAAETGLAHRVVVDGERITGVFRRNVQLASGQFAMLDDGMGFSLVPWKPVIEQRLGKTMTAVIRGSNVSWELERQHGISMK*