ggKbase home page

SCN18_30_10_14_R3_B_scaffold_1062_16

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(14690..15139)

Top 3 Functional Annotations

Value Algorithm Source
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=12498566 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 303
  • Evalue 1.00e-79
smpB; SsrA-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 149.0
  • Bit_score: 279
  • Evalue 4.60e-73
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 148.0
  • Bit_score: 280
  • Evalue 1.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAGCATCGTCGACAACAAAAAAGCCTTCCACGATTACTTCATCGAGGAAAAATACGAGGCCGGTCTGGTGCTCGAGGGCTGGGAGGTCAAGTCGATCCGCGCCGGCCGCGTGCAGCTGAAAGAAGCCTACGTCGTCGTGAGGAATGGCGCGATCTGGCTCATCGGCTGCCATATCAGTCCGTTGCCCACCGCGTCTTCGCATGTGCATCCCGATCCCACGCGTTCGCGCAAGCTTCTGATGCACGCGGCCGAGATCAACAAGCTGATCGGCAAAACCGAACGCGCCGGTTACACGCTGGTCCCGCTGGACATGCACTACACCCGCGGACGCATCAAGCTCAGCGTGGGTCTCGCCAAAGGCAAGAAACAGCATGACAAGCGCGCCGCCGAGAAAGAGCGCGAATGGCAGCGCGAGAAACAGCGCCTGGTGCGTACCGCGCAACGTTGA
PROTEIN sequence
Length: 150
MSIVDNKKAFHDYFIEEKYEAGLVLEGWEVKSIRAGRVQLKEAYVVVRNGAIWLIGCHISPLPTASSHVHPDPTRSRKLLMHAAEINKLIGKTERAGYTLVPLDMHYTRGRIKLSVGLAKGKKQHDKRAAEKEREWQREKQRLVRTAQR*