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SCN18_30_10_14_R3_B_scaffold_1062_26

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(22448..23722)

Top 3 Functional Annotations

Value Algorithm Source
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 id=12498576 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 424.0
  • Bit_score: 839
  • Evalue 1.20e-240
conjugal transfer protein TrbI similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 429.0
  • Bit_score: 676
  • Evalue 2.80e-192
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 426.0
  • Bit_score: 775
  • Evalue 2.20e-221

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1275
ATGAGCACGCCCGCCGCACCGCAGACACCGTCGACTGGGACAAATAAGGCCGACCCGGACACCTTGGCTCTGCGCGCTTCGCCGCGTCCGGTCACGCGGCTCAATCGGCGCATGCTGGCCGTGCTTGCAGGGGCGCTCGGCATCGTCATCCTGGGCGCCACACTCTGGTCCTTGCAGCCGCACAAGCGTGAGCGCAACCCGGCCACCGAGATGTACAACGTGGATCGCGTCTCACGGGCCGATAGCCTCGACCAGTTGCCCAAGGACTATACCAAAGTTGTGCCAATGGCTAAGCCTGTAGTACCGATGTTGGGTGAGCCATTGCCGGGCGACTTGGGGCCGGCCATCGTGCATGCGCAGAATCACGGGAACACGGGCGCGTTTCCTCCCGCGCAACCCGGCCGTATCGCACAGCCGGGCGATGCCGAGGATGCGGCGCGTTCGTCGGTGTTCTTCCGCAGCAGTAGTACAACAAATGCGGCACCGCCAAACACCGCAGCCGCAATCCAGCCCGAGCCGGCATCGGGCAATCAGGCCTTCAATCCGATGGCAACGGCATCGACACAGCCAGCCGATCCAACGGCTGCGCAGAATCGGCAGGAGCAGAAGCAGGCGTTTGTCGCCAATGGCGGCGATACGACCACCCGCAATCCGGCCAGCCTGCAACTGCCCGCCTCGCCCTACCAGGTGATGGCTGGCACCATCATTCCGGCGGCGCTGGTGACGGGCATCAACTCCGACCTGCCGGGGCAGGTCATCGCCAATGTCACCGAGGCGGTCTACGACACGGCCACGGGTCGCTTTCTGCTGATTCCGCAGGGGTCGCGGCTGATCGGCCGTTACGACAGCCAGGTTTCATTCGGGCAGCGACGGGTACTGCTGGTGTGGACGCGCTTGATCCTGCCCGATACTTCGTCGATTTCGCTCGACCGATTGCCTGGCATCGACCCGGCGGGCTATGCCGGGCTGGAGGATGGCGTCGATTGGCATTGGGATCGCATCCTTGCCGGTGCTGCGTTGTCCACGCTGCTCGGCGTCGGTGCGGAGCTGGCAGCACCCAACAACAGCAGCAGTACCGGTAGCGTCACCGTCGCCGTTCGCCAGAGCGCGCAGGACACCGTGAACCAGGTCGGTCAGGAGATCACCAAACGCAACGTGAGCATCCAGCCGACGCTCACTATCCGTCCCGGCTTCCCGATGCGGGTCATGGTGAACAAGGATCTGATTCTGCGACCGTACCAGCCGCTGTTCTTCCAAAGGGGATCGTCGCAATGA
PROTEIN sequence
Length: 425
MSTPAAPQTPSTGTNKADPDTLALRASPRPVTRLNRRMLAVLAGALGIVILGATLWSLQPHKRERNPATEMYNVDRVSRADSLDQLPKDYTKVVPMAKPVVPMLGEPLPGDLGPAIVHAQNHGNTGAFPPAQPGRIAQPGDAEDAARSSVFFRSSSTTNAAPPNTAAAIQPEPASGNQAFNPMATASTQPADPTAAQNRQEQKQAFVANGGDTTTRNPASLQLPASPYQVMAGTIIPAALVTGINSDLPGQVIANVTEAVYDTATGRFLLIPQGSRLIGRYDSQVSFGQRRVLLVWTRLILPDTSSISLDRLPGIDPAGYAGLEDGVDWHWDRILAGAALSTLLGVGAELAAPNNSSSTGSVTVAVRQSAQDTVNQVGQEITKRNVSIQPTLTIRPGFPMRVMVNKDLILRPYQPLFFQRGSSQ*