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SCN18_30_10_14_R3_B_scaffold_1062_28

Organism: SCN18_30_10_14_R3_B_SCNpilot_P_inoc_Thiobacillus_strain2_63_34_65_22

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(24735..25442)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbF n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D7A3 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 235.0
  • Bit_score: 447
  • Evalue 7.10e-123
conjugal transfer protein TrbF similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 235.0
  • Bit_score: 453
  • Evalue 2.80e-125
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AJP47671.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 235.0
  • Bit_score: 453
  • Evalue 1.40e-124

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Taxonomy

SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → SCNpilot_P_inoc_Thiobacillus_strain2_63_34 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGCGATTCAAACGACCCCAGGTGCGCTACGCGGACACACCGGAACCCGTCACCCCGTACCAAGCTGCCGCGCAGGTCTGGGACCAGCGCATCGGCAGTGCCCGCGTGCAGGCGAAGAACTGGCGGCTGATGGCCTTCGGCTGTCTGTCGCTCGCCTTGCTGATGGCGGGTGGCCTGGTGTGGCGTTCGGCGCAGTCCATCGTCACGCCTTATGTGGTCGAGGTGGCCACCGGCGGTCAGGTGCGTGCAGTCGGTGAAGCGGCCACGCCGTACAAGCCCAACGACGCGCAGATCGCCTACCACCTGGCGCGCTTTCTTACCGACGTGCGCTCGCTGTCGATCGACCCCATCGTCGTGCGGCAGAACTGGCTCGAAGCCTACGACTACACCACCGACACGGGCGCGGCAATGTTGAACGACTACGCGCGCACCAACGATCCATTCGCACGCGTCGGCCAGACCTCGACGGCCGTGGAGATCACCAGCGTGGTGCGCGCCAGCGACTCATCGTTCCAGGTGCGCTGGATCGAGCGCAGCTATGTGAACGGTTCGCCCTCGGGCACCGAACGCTGGACGGCCGTGCTGTCCATCGTGCTGCAACCGCCGCGCACCGAAGAGAGGCTGCGCAAGAACCCGCTAGGAATTTACGTGAACGGCATTTCCTGGAGCCGTGAACTCGACACGACCGAAGGAGCCAAGAAACCATGA
PROTEIN sequence
Length: 236
MRFKRPQVRYADTPEPVTPYQAAAQVWDQRIGSARVQAKNWRLMAFGCLSLALLMAGGLVWRSAQSIVTPYVVEVATGGQVRAVGEAATPYKPNDAQIAYHLARFLTDVRSLSIDPIVVRQNWLEAYDYTTDTGAAMLNDYARTNDPFARVGQTSTAVEITSVVRASDSSFQVRWIERSYVNGSPSGTERWTAVLSIVLQPPRTEERLRKNPLGIYVNGISWSRELDTTEGAKKP*