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SCN18_31_3_15_R5_B_scaffold_2704_5

Organism: SCN18_31_3_15_R5_B_SCN_pilot_derep_Thiobacillus_3_64_826

near complete RP 52 / 55 BSCG 50 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4328..4564)

Top 3 Functional Annotations

Value Algorithm Source
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12494059 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 159
  • Evalue 9.80e-37
rpmB; 50S ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 158
  • Evalue 6.20e-37
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 158
  • Evalue 3.10e-36

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGGCTCGCGTATGTGTCGTGACGGGCAAGAGGCCCATGGTCGGAAACAACGTTTCCCACGCCAACAATAAAACCAAGCGTCGTTTCCTGCCCAACCTGCAATACCGCCGGTTCTGGGTCGAAAGCGAAAATCGCTGGGTCCGTCTGCGTCTGTCCAATGCGGCGCTCCGCACCATCGACAAGAACGGCATCGAATCCGTCCTGGCCGACCTGCGCGCCCGCGGCGAAGCCGTCTAA
PROTEIN sequence
Length: 79
MARVCVVTGKRPMVGNNVSHANNKTKRRFLPNLQYRRFWVESENRWVRLRLSNAALRTIDKNGIESVLADLRARGEAV*