ggKbase home page

SCN18_31_3_15_R5_B_scaffold_2704_6

Organism: SCN18_31_3_15_R5_B_SCN_pilot_derep_Thiobacillus_3_64_826

near complete RP 52 / 55 BSCG 50 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4674..5342)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC; K03630 DNA repair protein RadC id=12494058 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 224.0
  • Bit_score: 420
  • Evalue 8.70e-115
DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 224.0
  • Bit_score: 389
  • Evalue 3.60e-106
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 224.0
  • Bit_score: 403
  • Evalue 1.20e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGGCGATTCGAGACTGGCCGGAAGACGCGCGCCCACGGGAGAAACTCCTGAAACGGGGCGCCGTGGCCCTGACCGATGCCGAACTGGTCGCGGTGTTCCTGCGCACAGGCGTCATCGGCAAAAGCGCGGTCGATCTCGGACGTGAGCTGATCGAGCGTTTTGGCAGCCTGGGAGGGCTGTGCCGTGCCGATAAAAAAACCGCCTGCGAAGCGCCCGGCGTCGGCGAAGCCAAATACGCACTGCTGCAGGCGGTGATGGAAATGGCGCGCCGCACCCTGGCCGAAGACATGCAGAAGGGCGACGCCCTCGCCTCCCCCGCCGCCGTGCGCGACTATCTGCGGCTGCTCTGCAAGGAATACGAAGTGTTCTGCTGCGTGTTTCTCGACGCGCAAAACCGCGTGATCGCGGTGGAAGAACTGTTTCGCGGCACGCTGACGCAGACCAGCGTCTACCCGCGCGAGATCATCAAGCGCGCACTGGCGCATAACGCCGCCGCGCTGATTCTGGCGCACAACCATCCCAGCGGGGTGGCCGAACCGAGCCAGGCCGACCGCAGCCTCACCCGCCAGCTGGCGGACGCGCTGGCGCTGGTGGACATCCGCGTGCTCGACCACTTCATCGTCGCCGGCGCGTCTTCGCTTTCGTTCATGGAAGCGGGGCATCTCTGA
PROTEIN sequence
Length: 223
MAIRDWPEDARPREKLLKRGAVALTDAELVAVFLRTGVIGKSAVDLGRELIERFGSLGGLCRADKKTACEAPGVGEAKYALLQAVMEMARRTLAEDMQKGDALASPAAVRDYLRLLCKEYEVFCCVFLDAQNRVIAVEELFRGTLTQTSVYPREIIKRALAHNAAALILAHNHPSGVAEPSQADRSLTRQLADALALVDIRVLDHFIVAGASSLSFMEAGHL*