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SCN18_31_3_15_R5_B_scaffold_1288_6

Organism: SCN18_31_3_15_R5_B_SCN_pilot_derep_Thiobacillus_3_64_826

near complete RP 52 / 55 BSCG 50 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(2490..3023)

Top 3 Functional Annotations

Value Algorithm Source
two component Fis family transcriptional regulator; K15012 two-component system, response regulator RegA id=12494244 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 339
  • Evalue 2.00e-90
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 175.0
  • Bit_score: 288
  • Evalue 8.90e-76
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 174.0
  • Bit_score: 295
  • Evalue 2.80e-77

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAAGATGAAACTGCTGATCGTCGAGGACGATGCCGATTTTGCCGCCGCGCTGGCGCGTGCCATGAAGAAACGGGGGATCGAAGTGGCCCTCGCGCACGATGCAATCGAAGCCCGGGCCGTCGCCGCGGCCTTTGCCCCCAGCCACGCCGTCGTCGATTTGAAGCTGCCCGGCGAATCGGGACTGGCGGTCGTGGCCGCGCTCGCCGCACGCACGCCCCCTCCCGCCATGGTGGTGCTCACCGGCTATGCCAGTATCGCCACGGCCGTCGAAGCGGTACGCCTGGGCGCACGGCACTACCTGGCGAAACCGGCGGACGCCGACGAAATCCTCGCCGCGCTCATGCGCGACCAGCCCGATGCCGCACTGGAAGTCAGCGCCGAACCGCTATCCGTGGCCCGGCTGGAATGGGAGCATATCCAGAAGGTGCTGAACGAGTACGACGGCAACATCTCCGCCACCGCGCGCGCGCTGAAAATGCACCGCCGCACACTGCAAAGGAAACTCGACAAGAACCCGCCCAAGGCGGGCTGA
PROTEIN sequence
Length: 178
MKMKLLIVEDDADFAAALARAMKKRGIEVALAHDAIEARAVAAAFAPSHAVVDLKLPGESGLAVVAALAARTPPPAMVVLTGYASIATAVEAVRLGARHYLAKPADADEILAALMRDQPDAALEVSAEPLSVARLEWEHIQKVLNEYDGNISATARALKMHRRTLQRKLDKNPPKAG*