ggKbase home page

SCN18_31_3_15_R5_B_scaffold_3453_1

Organism: SCN18_31_3_15_R5_B_SCN_pilot_derep_Thiobacillus_3_64_826

near complete RP 52 / 55 BSCG 50 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..356)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein id=12495519 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 118.0
  • Bit_score: 246
  • Evalue 1.20e-62
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 114.0
  • Bit_score: 107
  • Evalue 1.40e-21
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AEF98558.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 114.0
  • Bit_score: 107
  • Evalue 7.20e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220 → SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGATGCGCCATCTGGGACTCGCCGGCTTGTTGTGGTGGGCCGTCACGGCGCAGGCAAGCCCGACGTGGAACGGCCTGTGGCGTACCCCCGACCAGCGCGCGCAACAGCTCCTGCAGCAGGGCAAGGCGGCCGAAGCGTCACGGCTCTTTCAGGATCCGCGCCGCAAGGCGTATGCCGAGTTGCAGGCCGGCAATTTTTCGCAGGCGGCGCAGGATTTCCATGCGTTCAACGACACCGACGGCCAGTACAACCGCGGCAATGCCCTGGCGCGCGCGGGTCATCTGCAGGAGGCGATCCAGGCCTACGACGCGGCGCTGGCGCATGATCCGGACAATGCCGACGCGCGGCATAAC
PROTEIN sequence
Length: 118
MMRHLGLAGLLWWAVTAQASPTWNGLWRTPDQRAQQLLQQGKAAEASRLFQDPRRKAYAELQAGNFSQAAQDFHAFNDTDGQYNRGNALARAGHLQEAIQAYDAALAHDPDNADARHN