ggKbase home page

SCN18_31_3_15_R5_B_scaffold_5378_4

Organism: SCN18_31_3_15_R5_B_SCN_pilot_derep_Thiobacillus_3_64_826

near complete RP 52 / 55 BSCG 50 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3299..3412)

Top 3 Functional Annotations

Value Algorithm Source
integrase family protein; K14059 integrase id=12494894 bin=THIO_HI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 37.0
  • Bit_score: 74
  • Evalue 2.00e-11
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 37.0
  • Bit_score: 68
  • Evalue 2.00e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220 → SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 114
ATGCTCGTGAAAGTCTATGGCCGCTGGATAGATTCGGAGTCCCTCAGAGATCTGGGGCGCATCTGGCTGGGGATGAAAAAACTCGTTCAAATTGCCCAAAATTTGCCAAAATAA
PROTEIN sequence
Length: 38
MLVKVYGRWIDSESLRDLGRIWLGMKKLVQIAQNLPK*