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SCN18_31_3_15_R5_B_scaffold_2038_1

Organism: SCN18_31_3_15_R5_B_SCN_pilot_derep_Thiobacillus_3_64_826

near complete RP 52 / 55 BSCG 50 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(3..1097)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12493603 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 365.0
  • Bit_score: 691
  • Evalue 3.30e-196
RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 365.0
  • Bit_score: 641
  • Evalue 8.60e-182
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 364.0
  • Bit_score: 681
  • Evalue 4.80e-193

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1095
ATGAATCTGTCGCGGCTCTTCATCGAGCGCCCGGTCGCCACGCTGATGCTGGTGCTGGCGATGGCGCTGTTCGGTGCGATCGCCTACAAGCAGCTGCCGGTGAACGACCTGCCGCAGGTGGATTTTCCGACCTTGCGCATCAGCGCCGCCCTGCCCGGCGCCAACCCCGAGACCATGGCCAACACCGTGGCGACGCCGCTGGAACGGCAGCTGGCGACGGTGGCGGGGATCGAGTCGATGAGCTCGCAATCGGGCCAGGGCTCGACCAGTATCACGCTGCAGTTCGAACTCGGGCGCGACATCGATGCCGCCGCGCAGGACGTGCAGACCGCCATCGCGCAGGCGGCGCGCAACCTGCCGCAGGGCATGGATCCGCCTCAATTGAGGAAAATCAATCCGGCCGATTCGCCCATCCTGTATCTGGCGCTGTCGGCCGACCGTCTGCCCCTGACCGAACTCGACGCCATCGCCGATTCGCGCGTGGCGCAAAAGCTGTCCGGGCTGTCCGGCGTGGCGCAGGTACTGGTGTTCGGTTCGCAGAAATACGCGCTGCGTCTCTACCTCGATCCCGCCAAGCTGCAGCAGCGCGGGCTGACGTTTGCCGATGTGGTCACGGCGGTGCAGGCCGCCAACGCCAACCTGCCGTCCGGCACGCTCGACGGCGCCAGCCGCGCCTATACGGTGAAGGCGCCGGTGGCGCTGGCCAACGCGGCGGATTTCGGCGACATCATCGTCGCCTATCACGACGGCACCGCGCTGCGGGTGAAAGACCTCGGCCGGGCCGAGGATGGCGTCGAGGACGACAAGCGCAAGACCTGGTACAACGGCACCCGCGCCATCGTGCTGGCGGTGCAGCGCCAGCCGGGGGCGAACACGGTCGCGGTTGCCGACCGCATCCGCGCGATGCTGCCGCAGATCGAGGCGGAGCTGCCCGACAGCGTTCGCCTGCAGGTGCATTTCGACCGCTCGCGCTTCGTCAAGGATTCGCTGCACGAGGTGAACTTCACGCTGCTGCTCGCGCTGGGCCTGGTGATCCTCGTCATCTTCGCCTTCCTGCACAATGTCCGCGCCACGCTGATCGCCGCGCTGGTGCTG
PROTEIN sequence
Length: 365
MNLSRLFIERPVATLMLVLAMALFGAIAYKQLPVNDLPQVDFPTLRISAALPGANPETMANTVATPLERQLATVAGIESMSSQSGQGSTSITLQFELGRDIDAAAQDVQTAIAQAARNLPQGMDPPQLRKINPADSPILYLALSADRLPLTELDAIADSRVAQKLSGLSGVAQVLVFGSQKYALRLYLDPAKLQQRGLTFADVVTAVQAANANLPSGTLDGASRAYTVKAPVALANAADFGDIIVAYHDGTALRVKDLGRAEDGVEDDKRKTWYNGTRAIVLAVQRQPGANTVAVADRIRAMLPQIEAELPDSVRLQVHFDRSRFVKDSLHEVNFTLLLALGLVILVIFAFLHNVRATLIAALVL