| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| 30S ribosomal protein S1 | rbh |
KEGG
DB: KEGG |
57.3 | 468.0 | 553 | 5.50e-155 | gni:GNIT_1780 |
| 30S ribosomal protein S1 | similarity |
KEGG
DB: KEGG |
57.3 | 468.0 | 553 | 5.50e-155 | gni:GNIT_1780 |
| Ribosomal protein S1 n=1 Tax=Idiomarina loihiensis RepID=Q5QZ52_IDILO (db=UNIREF evalue=4.0e-152 bit_score=541.0 identity=64.65 coverage=78.8) | similarity |
UNIREF
DB: UNIREF |
64.65 | 78.8 | 541 | 4.00e-152 | gni:GNIT_1780 |
| seg (db=Seg db_id=seg from=400 to=415) | iprscan |
interpro
DB: Seg |
null | null | null | null | gni:GNIT_1780 |
| seg (db=Seg db_id=seg from=437 to=461) | iprscan |
interpro
DB: Seg |
null | null | null | null | gni:GNIT_1780 |
| seg (db=Seg db_id=seg from=467 to=488) | iprscan |
interpro
DB: Seg |
null | null | null | null | gni:GNIT_1780 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=123 to=144 evalue=1.3e-64 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.30e-64 | gni:GNIT_1780 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=201 to=220 evalue=1.3e-64 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.30e-64 | gni:GNIT_1780 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=241 to=259 evalue=1.3e-64 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.30e-64 | gni:GNIT_1780 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=37 to=54 evalue=1.3e-64 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.30e-64 | gni:GNIT_1780 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=19 to=35 evalue=1.3e-64 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.30e-64 | gni:GNIT_1780 |
| RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=66 to=86 evalue=1.3e-64 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 1.30e-64 | gni:GNIT_1780 |
| no description (db=HMMSmart db_id=SM00316 from=101 to=171 evalue=2.4e-28) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.40e-28 | gni:GNIT_1780 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=100 to=184 evalue=1.2e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.20e-27 | gni:GNIT_1780 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=166 to=252 evalue=1.1e-25 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.10e-25 | gni:GNIT_1780 |
| no description (db=HMMSmart db_id=SM00316 from=186 to=258 evalue=8.1e-25) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 8.10e-25 | gni:GNIT_1780 |
| S1 (db=HMMPfam db_id=PF00575 from=101 to=171 evalue=2.0e-24 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.00e-24 | gni:GNIT_1780 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=261 to=347 evalue=4.3e-21 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.30e-21 | gni:GNIT_1780 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=103 to=173 evalue=5.1e-21 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 5.10e-21 | gni:GNIT_1780 |
| S1 (db=HMMPfam db_id=PF00575 from=189 to=258 evalue=9.6e-21 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 9.60e-21 | gni:GNIT_1780 |
| no description (db=HMMSmart db_id=SM00316 from=273 to=346 evalue=1.0e-19) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.00e-19 | gni:GNIT_1780 |
| TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=97 to=223 evalue=5.5e-19) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 5.50e-19 | gni:GNIT_1780 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=183 to=260 evalue=2.5e-18 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.50e-18 | gni:GNIT_1780 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=13 to=99 evalue=8.4e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 8.40e-18 | gni:GNIT_1780 |
| S1 (db=HMMPfam db_id=PF00575 from=272 to=346 evalue=1.2e-16 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.20e-16 | gni:GNIT_1780 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=275 to=349 evalue=9.0e-15 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
null | null | null | 9.00e-15 | gni:GNIT_1780 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=341 to=450 evalue=2.8e-13 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.80e-13 | gni:GNIT_1780 |
| S1 (db=HMMPfam db_id=PF00575 from=13 to=82 evalue=5.9e-10 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 5.90e-10 | gni:GNIT_1780 |
| no description (db=HMMSmart db_id=SM00316 from=14 to=82 evalue=2.0e-08) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.00e-08 | gni:GNIT_1780 |
| no description (db=HMMSmart db_id=SM00316 from=361 to=423 evalue=0.0026) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 2.60e-03 | gni:GNIT_1780 |
| S1 (db=ProfileScan db_id=PS50126 from=363 to=424 evalue=11.562 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.16e+01 | gni:GNIT_1780 |
| S1 (db=ProfileScan db_id=PS50126 from=16 to=82 evalue=13.474 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.35e+01 | gni:GNIT_1780 |
| S1 (db=ProfileScan db_id=PS50126 from=275 to=346 evalue=20.291 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.03e+01 | gni:GNIT_1780 |
| S1 (db=ProfileScan db_id=PS50126 from=188 to=258 evalue=20.854 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.09e+01 | gni:GNIT_1780 |
| S1 (db=ProfileScan db_id=PS50126 from=103 to=171 evalue=23.441 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 2.34e+01 | gni:GNIT_1780 |
| rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated |
UNIPROT
DB: UniProtKB |
100.0 | 499.0 | 982 | 2.40e-283 | ggdbv1_88003364 | |
| 30S ribosomal protein S1 n=3 Tax=Glaciecola RepID=G4QGU8_GLANF | similarity |
UNIREF
DB: UNIREF90 |
57.3 | null | 553 | 8.00e-155 | gni:GNIT_1780 |
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