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OR_07102018_0_5m_scaffold_2284_4

Organism: OR_07102018_0_5m_Thiomonas_64_5

near complete RP 33 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 12 / 38
Location: 3367..3882

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 137.0
  • Bit_score: 191
  • Evalue 1.90e-46
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 137.0
  • Bit_score: 191
  • Evalue 9.30e-46
Formamidopyrimidine-DNA glycosylase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X4F3_THIK1 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 137.0
  • Bit_score: 191
  • Evalue 6.60e-46

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Taxonomy

Thiomonas intermedia → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCCCGAACTCCCCGAAGTCGAAGTCACCCGCCTCGGACTGGAGCCCGCGCTGCTGGGCGCGCGGGTCATCGCGCTGCGGCTGGGCAAGCCGCTGCGCTGGCCGCTGAACATCGACCCGGCTGCGCTCGCCGGGCTGCGCATCACGGCCCTGCAGCGGCGCGGCAAGTACCTGTTGCTGCACACCGATGCAGGTGCGCTCATCGTGCATCTGGGCATGTCGGGGTCGCTACGCTGGACTCCCGCTCAGCACATGCCCGAGCCGCTCTCGCCGCACGAGCATGTGGAACTGCAGACCGATCGCGGCGTGCTGCGTCTGCGCGATCCGCGCCGCTTCGGCGCCCTGCTGCTGGTGGCGGCGACGGCGCTGCGTGCGGCACCGGCGCTGGGCATGGACGCGACCTGGGCCTACGCCGCCGCCTCGGTGCTGTGGGCGGCGAGCTTTTTGCTCTGGCTCACGGGCTACCTGCCCGCCATGGCCGACCCGGCCCGGCGCGCGCACGACAAATGCGGCTAG
PROTEIN sequence
Length: 172
MPELPEVEVTRLGLEPALLGARVIALRLGKPLRWPLNIDPAALAGLRITALQRRGKYLLLHTDAGALIVHLGMSGSLRWTPAQHMPEPLSPHEHVELQTDRGVLRLRDPRRFGALLLVAATALRAAPALGMDATWAYAAASVLWAASFLLWLTGYLPAMADPARRAHDKCG*