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OR_07102018_0_5m_scaffold_3471_1

Organism: OR_07102018_0_5m_Thiomonas_64_5

near complete RP 33 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 12 / 38
Location: comp(1..1320)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase beta chain (RNAP beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 440.0
  • Bit_score: 855
  • Evalue 3.50e-246
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 440.0
  • Bit_score: 855
  • Evalue 1.70e-245
DNA-directed RNA polymerase subunit beta n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP17_THIA3 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 440.0
  • Bit_score: 855
  • Evalue 1.20e-245

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Taxonomy

Thiomonas intermedia → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGTCCTACTCGTTCACTGAGAAAAAGCGCATTCGGAAAAGTTTTGGCAGCCGCCAAAGTGTTCTGGATGTCCCCTATCTGCTGGCTACGCAGATCAACTCCTACGAGGCCTTTTTGCAAAAAGACCTTCCCTTGCCGCAGCGCAAGGACGAAGGGCTGGAAGCGGCGTTCCGCGCCATTTTCCCCATCGTGTCGCACAACCAGTATGTGCGCATGGAATACAACGGCTACACCCTGGCACGCCCGGTGTTCGACGTGCGCGAATGCCAGCAGCGTGGCCTGACCTTTGCCTCGGCGCTGCGCGCCAAGGTGCGCCTGATCGTGATGGACCGCGAGGCGGCCAAGCCCACGGTCAAGGAAGTGAAGGAACAGGAGGTCTATATGGGCGAAATTCCGCTCATGACCGACAAGGGCTCTTTCATCATCAACGGCACCGAGCGCGTCATCGTCAGCCAGCTGCATCGCTCGCCCGGCGTGTTTTTCGAGCACGACAAGGGCAAGACCCACAGCTCGGGCAAGCTGCTGTTCTCGGCGCGGATCATCCCCTATCGCGGCTCGTGGCTCGACTTCGAGTTCGATGCCAAGGACATCCTGTACTTCCGCGTGGACCGTCGGCGCAAGATGCCGGTCACCATTCTGCTCAAGGCCCTGGGCCTGAACCCCGAACAGATCCTGGCGCACTTCTTCGCCTTCGATCACATGCAGTTGATGGACGATGGCGCCCTGCTCGAATTCGTCCCGGATCACTTCAAGGGTGAGGTCGCGCGTTTCGACCTGATCGACCAGAACGGCAAAGTGGTTGTCGCCAAGGATAAGCGCATCAACACCCGCCACCTGCGCGAGCTGGAGCAGGGCGGCACGCAACGCCTGTCGGTGCCGGAAGACTTTCTGCTCGGCAAGGTGCTGGCGAAAAACCTGGTGTCGCAGGACACCGGCGAAATCGTTGCGCGTGCCAACGATGAGCTGACCGAGCCGCTGCTGAAAAAAATCCGCGAAGCCGGCATTCAGCAAATCCAGACGCTTTACATCAACGACCTCGACCAGGGCGCGTTCATTTCGCAGACCTTGCGCATCGATGAAGTGGCCGACCAGCTCGGCGCCAAGGTGGCGATCTACCGCATGATGCGCCCCGGCGAGCCGCCGACCGAAGACGCGGTCGAGGCCCTGTTCAGCCGCCTGTTCTTCGACGCCGACGCCTACGACCTGTCGCGCGTGGGGCGCATGAAGTTCAACCGCCGCCTCGGCCGTGAAGAGATCGAAGGCGAGATGGTGCTGTCGCATGAAGACATCATGGCGGTGATCAAACTGCTGGTCGAGTTG
PROTEIN sequence
Length: 440
MSYSFTEKKRIRKSFGSRQSVLDVPYLLATQINSYEAFLQKDLPLPQRKDEGLEAAFRAIFPIVSHNQYVRMEYNGYTLARPVFDVRECQQRGLTFASALRAKVRLIVMDREAAKPTVKEVKEQEVYMGEIPLMTDKGSFIINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDAKDILYFRVDRRRKMPVTILLKALGLNPEQILAHFFAFDHMQLMDDGALLEFVPDHFKGEVARFDLIDQNGKVVVAKDKRINTRHLRELEQGGTQRLSVPEDFLLGKVLAKNLVSQDTGEIVARANDELTEPLLKKIREAGIQQIQTLYINDLDQGAFISQTLRIDEVADQLGAKVAIYRMMRPGEPPTEDAVEALFSRLFFDADAYDLSRVGRMKFNRRLGREEIEGEMVLSHEDIMAVIKLLVEL