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OR_07102018_0_5m_scaffold_1893_4

Organism: OR_07102018_0_5m_Thiomonas_64_5

near complete RP 33 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 12 / 38
Location: comp(3358..4716)

Top 3 Functional Annotations

Value Algorithm Source
putative 23S rRNA (Uracil-5-)-methyltransferase rumA (23S rRNA(M-5-U1939)-methyltransferase) (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 459.0
  • Bit_score: 744
  • Evalue 1.50e-212
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 459.0
  • Bit_score: 744
  • Evalue 7.50e-212
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRD4_THIA3 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 459.0
  • Bit_score: 744
  • Evalue 5.40e-212

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Taxonomy

Thiomonas arsenitoxydans → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
CTTGAGGCGCGCGGCGTCGGTCGCAGTGAAAACGGCAAGGTGGTCTTCGTTTCCAATGCCCTGCCGGGTGAGCGGATTCAGGCTAGCATCTTACGCAGCAAGCGGAATTGGGAGTCCGGCACGGCGGTCGCTTGGGACAATGCGTCCAGCAGCCGTGTGACGCCTAAATGTTCCCATTTTGGCGTCTGCGGTGGCTGCAGCATGCAGCATGTCGATCCTGCGGCCCAATTGGCATTCAAGCAGCGCATTTTGGAAGATGATTTCTGGCATCTCAGCCGACTGAGGCCGCAAACCCTGCTGCGTCCAATCGCCGGGCCGAGTTGGGGCTATCGCACCCGGGCGCGACTGACTGTCCGTCTGGTGATCAAAAAGGGTGGGGTACTCGTTGGATTCCATGAAAAAGGGTCCAGCTATGTGGCAGATATGCGCAGTTGTGCGATTTTGCCGCAAAAAGTGTCAGAACTGCTACTCCCCCTGCGAGCGCTGATCGCCAGCCTCTCCCATCCTGAGCGGGCGCCGCAAATCGAATTGGCCATGGGCGACAGCGTGATTGCGCTGGTCTTGCGGCATCTGGAGCCATTGACCGAGTCGGATCGGCAGCTTCTGCGCGACTTTGGTGTCAAGCACCATGTGCAATGGTGGTTGCAGTCAAAGGGGCCCGATTCCGTGGTCTTACTTGATGGCGAAGCAGAACAACTGCGCTACGCCCTGCCGGAGTTTGGCATCACCATGCCGTTCCGCCCGACCGATTTCACGCAGGTGAACCCGCAAATCAACCGCGTCATGGTGGCGCGTGCGTTGCGTCTGCTCAAGGCGCAGGCGACGGATCGGGTCATCGACTGGTTTTGCGGGCTGGGAAATTTCACCCTGCCGATCGCCACGCAGGCGCGCAAGGTGCTTGGTGGCGAGGGGAGCGCCACGCTGGTGGCGCGTGCGCTGGATAACGCTTTGCAGAACGATTTGCAGGATAAGGTGATGTTTGCCGCGCGCAATCTGTTCGAGATGAATGCGGCAGATCTGCGCGCCTATGGCGAGGCGGATTTGTGGCTGGTGGACCCGCCGCGCGATGGCGCGCTGGCCTTGTGCAAGGCTTTGGTCGCTGCTGTTGGCGGAACCCTGTCCTCCAGCGCAGATGGGTCACAAACTGCGGAGTTAGCGTCTGGCGATCATGGCGGAGCACATGTGCCGTTCACCCCACCACGGCGGATTGTTTACGTCTCGTGCAATCCCGCCACGCTGGCGCGGGATGCTGGTTTGCTGGTGCATCACGGCGGCTACATTCTGCGCGCGGCCGGGGTGATGAATATGTTCCCGCACACGGCGCATGTGGAGTCGATGGCGGTGTTTGAGCGCGAGTAA
PROTEIN sequence
Length: 453
LEARGVGRSENGKVVFVSNALPGERIQASILRSKRNWESGTAVAWDNASSSRVTPKCSHFGVCGGCSMQHVDPAAQLAFKQRILEDDFWHLSRLRPQTLLRPIAGPSWGYRTRARLTVRLVIKKGGVLVGFHEKGSSYVADMRSCAILPQKVSELLLPLRALIASLSHPERAPQIELAMGDSVIALVLRHLEPLTESDRQLLRDFGVKHHVQWWLQSKGPDSVVLLDGEAEQLRYALPEFGITMPFRPTDFTQVNPQINRVMVARALRLLKAQATDRVIDWFCGLGNFTLPIATQARKVLGGEGSATLVARALDNALQNDLQDKVMFAARNLFEMNAADLRAYGEADLWLVDPPRDGALALCKALVAAVGGTLSSSADGSQTAELASGDHGGAHVPFTPPRRIVYVSCNPATLARDAGLLVHHGGYILRAAGVMNMFPHTAHVESMAVFERE*