ggKbase home page

OR_07102018_0_5m_scaffold_6620_3

Organism: OR_07102018_0_5m_Thiomonas_64_5

near complete RP 33 / 55 MC: 2 BSCG 43 / 51 MC: 2 ASCG 12 / 38
Location: comp(1249..1845)

Top 3 Functional Annotations

Value Algorithm Source
Putative Integral outer membrane protein TolC, efflux pump component n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CUE8_THIA3 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 197.0
  • Bit_score: 319
  • Evalue 1.40e-84
putative Integral outer membrane protein TolC, efflux pump component similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 197.0
  • Bit_score: 319
  • Evalue 4.10e-85
Putative Integral outer membrane protein TolC, efflux pump component {ECO:0000313|EMBL:CAZ88917.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 197.0
  • Bit_score: 319
  • Evalue 2.00e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiomonas arsenitoxydans → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GCGCAGGTGGAAACGGCGCTCAGGAATCTACCGCGCACCCGCCCCGATCTGATGGCGCTGCAGGCCGGTTATGCGGCGCAGGAGCAGAAGGTGTGGCAGTCCGTGCTCGGCCAGTTCCCCGCGTTCAACCTCGGCTTCACCCGCGCGCGCGACACCGCGGGAGTGAACACCGTGGGCTTTGGTGTGAGCATCAGCCTGCCGCTGTTCAACCGCAACCAGGGCGTGATTGCCACGCAGCGCGCCACCCGCGCGCAACTGCGCGCCGACTATCAGGCCCGGCTCGACCAGGCCGATGCCGACGTGCGCCAGGCGCAGGCCGACCTCGCGCTGCTGCAGCAACAGCGCCAGGCGTTGCTGGCCGCGCTGCCCGCGCTGGAATCTGCCGAGGCCGCGGCGCTACAGGCGCTGCAGCACGGCGGCATGACCCTGCTCGAATTCATCAACCAGCGCACCGCCCTGCTCGACCAGCGTCTGGCTCTGCAGGCCAACGCCCAGCAGACCGAAGAACAGGCGCTGGCGCTGCAGCTCCTCACCGGTCTGGGCCCGTACCGCCACGCTGCCGCCACGCCGTTCCTCCCCTCCAAGCAACAGCCATGA
PROTEIN sequence
Length: 199
AQVETALRNLPRTRPDLMALQAGYAAQEQKVWQSVLGQFPAFNLGFTRARDTAGVNTVGFGVSISLPLFNRNQGVIATQRATRAQLRADYQARLDQADADVRQAQADLALLQQQRQALLAALPALESAEAAALQALQHGGMTLLEFINQRTALLDQRLALQANAQQTEEQALALQLLTGLGPYRHAAATPFLPSKQQP*