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GD18-4_B1_scaffold_27519

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_27519_1
unknown

Not on your lists

comp(3..89)
-----------------
DNA (87bp)
protein (29aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(226..1542)
-----------------
DNA (1317bp)
protein (439aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=2 Tax=Geobacter sulfurreducens RepID=TRMFO_GEOSL
tRNA m(5)U-54 MTase {ECO:0000313|EMBL:AKF09268.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
trmFO; tRNA (5-methyl-U54)-methylenetransferase/reductase
GD18-4_B1_scaffold_27519_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1641..3254
-----------------
DNA (1614bp)
protein (538aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYQ1_SORC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAN97564.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_27519_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3300..5354
-----------------
DNA (2055bp)
protein (685aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Sensor histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FGA1_SORC5
GD18-4_B1_scaffold_27519_5
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

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comp(5555..6742)
-----------------
DNA (1188bp)
protein (396aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase id=1849791 bin=GWB2_Elusimicrobium_63_22 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
phospholipase
Tax=GWB2_Elusimicrobia_63_22_curated
GD18-4_B1_scaffold_27519_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6744..7457)
-----------------
DNA (714bp)
protein (238aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIG5_SORCE
imidazole glycerol phosphate synthase
GD18-4_B1_scaffold_27519_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7504..8181)
-----------------
DNA (678bp)
protein (226aa)
hisH; amidotransferase (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:CAN92982.1};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBB1_SORC5
GD18-4_B1_scaffold_27519_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8206..8796)
-----------------
DNA (591bp)
protein (197aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00263879};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XZQ4_SORCE
imidazoleglycerol-phosphate dehydratase
GD18-4_B1_scaffold_27519_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9016..9891)
-----------------
DNA (876bp)
protein (292aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000255|HAMAP-Rule:MF_00158}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Pantothenate synthetase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=PANC_SORC5
GD18-4_B1_scaffold_27519_10
unknown

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9958..11415
-----------------
DNA (1458bp)
protein (486aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11466..12512
-----------------
DNA (1047bp)
protein (349aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=HRCA_SORC5
hrcA; heat-inducible transcriptional repressor
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_27519_12
unknown

Not on your lists

comp(12548..13150)
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_13
unknown

Not on your lists

13356..14507
-----------------
DNA (1152bp)
protein (384aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14539..15144
-----------------
DNA (606bp)
protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF00410.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_27519_15
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15146..15700
-----------------
DNA (555bp)
protein (185aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XR54_SORCE
hypothetical protein
GD18-4_B1_scaffold_27519_16
unknown

Not on your lists

comp(16230..16826)
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_17
unknown

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comp(16948..17556)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein
GD18-4_B1_scaffold_27519_18
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17617..20262)
-----------------
DNA (2646bp)
protein (882aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKN8_SORC5
Uncharacterized protein {ECO:0000313|EMBL:AKF83224.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
hypothetical protein
GD18-4_B1_scaffold_27519_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20483..20668)
-----------------
DNA (186bp)
protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF03177.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GD18-4_B1_scaffold_27519_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21026..21493)
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZY5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91216.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_27519_21
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21651..22451)
-----------------
DNA (801bp)
protein (267aa)
Photosystem I assembly BtpA n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3K0_SPHTD
Photosystem I biogenesis protein BtpA {ECO:0000313|EMBL:EYF05538.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
photosystem I assembly BtpA
GD18-4_B1_scaffold_27519_22
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22517..23776)
-----------------
DNA (1260bp)
protein (420aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDP0_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN99381.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_27519_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23773..24333)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YD41_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42281.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_24
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24333..25871)
-----------------
DNA (1539bp)
protein (513aa)
Putative general secretion pathway protein L n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDP5_SORC5
gspL; general secretion pathway protein L
Putative general secretion pathway protein L {ECO:0000313|EMBL:CAN99383.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_27519_25
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25882..26754)
-----------------
DNA (873bp)
protein (291aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YHC8_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02917.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_27519_26
unknown

Not on your lists

27063..27335
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

GD18-4_B1_scaffold_27519_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27328..28038)
-----------------
DNA (711bp)
protein (237aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBP7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42284.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(28035..29000)
-----------------
DNA (966bp)
protein (322aa)
Putative general secretion pathway protein I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDQ6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF02919.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
gspI; general secretion pathway protein I
GD18-4_B1_scaffold_27519_29
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28987..29733)
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YD45_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP42286.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_27519_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29741..30172)
-----------------
DNA (432bp)
protein (144aa)
General secretion pathway protein G n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDR1_SORC5
hypothetical protein
General secretion pathway protein G {ECO:0000313|EMBL:CAN99388.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying items 1-30 of 76 in total

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