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GD18-4_B1_scaffold_31931

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_31931_31
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(35642..35914)
-----------------
DNA (273bp)
protein (91aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GBT3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96087.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_31931_32
unknown

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36004..36654
-----------------
DNA (651bp)
protein (217aa)

This feature has no annotations

GD18-4_B1_scaffold_31931_33
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(36854..38155)
-----------------
DNA (1302bp)
protein (434aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIJ2_SORCE
Adenylosuccinate lyase {ECO:0000313|EMBL:AKF05521.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_31931_34
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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38333..38650
-----------------
DNA (318bp)
protein (106aa)
50S ribosomal protein L31 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8A0_ANADF
LSU ribosomal protein L31p {ECO:0000313|EMBL:AKF10607.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
rpmE; 50S ribosomal protein L31
GD18-4_B1_scaffold_31931_35
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38832..39977
-----------------
DNA (1146bp)
protein (382aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9K9_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN99199.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_31931_36
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40014..41144
-----------------
DNA (1131bp)
protein (377aa)
Peptide chain release factor 1 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQY6_SORCE
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_31931_37
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41147..41740
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZC8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM81012.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
GD18-4_B1_scaffold_31931_38
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41925..42917
-----------------
DNA (993bp)
protein (331aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XM05_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33471.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_31931_39
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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42924..47492
-----------------
DNA (4569bp)
protein (1523aa)
Fis family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XG05_SORCE
Fis family transcriptional regulator {ECO:0000313|EMBL:AGP32062.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Fis family transcriptional regulator
GD18-4_B1_scaffold_31931_40
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47814..48641
-----------------
DNA (828bp)
protein (276aa)
Prolyl-tRNA synthetase suspected. See adjacent gene [GD18-4_B1_scaffold_31931_41].
Tax=RBG_16_Desulfobacca_58_9_curated
prolyl-tRNA synthetase
Proline--tRNA ligase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5A3_GEOUR
GD18-4_B1_scaffold_31931_41
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


48593..49552
-----------------
DNA (960bp)
protein (320aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000371E491
Prolyl-tRNA synthetase {ECO:0000313|EMBL:AKF05531.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
prolyl-tRNA synthetase
GD18-4_B1_scaffold_31931_42
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49552..50607
-----------------
DNA (1056bp)
protein (352aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y797_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41307.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_31931_43
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50679..51794
-----------------
DNA (1116bp)
protein (372aa)
Parallel beta-helix repeat protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X9E1_CELAD
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat protein {ECO:0000313|EMBL:ADV47680.1}; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630).;"
GD18-4_B1_scaffold_31931_44
unknown

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51924..52199
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

GD18-4_B1_scaffold_31931_45
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52203..52991)
-----------------
DNA (789bp)
protein (263aa)
Protein kinase domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDK1_9DELT
Protein kinase domain protein {ECO:0000313|EMBL:EDM76044.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
GD18-4_B1_scaffold_31931_46
unknown

Not on your lists

comp(53078..54538)
-----------------
DNA (1461bp)
protein (487aa)

This feature has no annotations

GD18-4_B1_scaffold_31931_47
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54634..56448)
-----------------
DNA (1815bp)
protein (605aa)
Long-chain fatty acid--CoA ligase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHP4_SORCE
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EYF08469.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
long-chain fatty acid--CoA ligase
GD18-4_B1_scaffold_31931_48
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56571..57635)
-----------------
DNA (1065bp)
protein (355aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9X2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN94812.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_31931_49
unknown

Not on your lists

57874..58170
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

GD18-4_B1_scaffold_31931_50
unknown

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58121..58573
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

GD18-4_B1_scaffold_31931_51
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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58580..59341
-----------------
DNA (762bp)
protein (254aa)
ATP synthase subunit a n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8G4_SORCE
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ATP synthase subunit A
GD18-4_B1_scaffold_31931_52
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59449..59802
-----------------
DNA (354bp)
protein (118aa)
atpC2; H(+)-transporting two-sector ATPase (EC:3.6.3.14)
ATP synthase subunit c n=2 Tax=Sorangium cellulosum RepID=ATPL_SORC5
ATP synthase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; ATP synthase F(0) sector subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; F-type ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; Short=F-ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396};; Lipid-binding protein {ECO:0000255|HAMAP-Rule:MF_01396}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_31931_53
unknown

Not on your lists

59974..60927
-----------------
DNA (954bp)
protein (318aa)

This feature has no annotations

GD18-4_B1_scaffold_31931_54
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60940..62652)
-----------------
DNA (1713bp)
protein (571aa)
ABC-1 domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JA59_ANAD2
Ubiquinone biosynthesis monooxygenase UbiB {ECO:0000313|EMBL:AKF05689.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
ABC-1 domain-containing protein
GD18-4_B1_scaffold_31931_55
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62724..64301)
-----------------
DNA (1578bp)
protein (526aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN94426.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN94426.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F1W2_SORC5
GD18-4_B1_scaffold_31931_56
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64377..65840
-----------------
DNA (1464bp)
protein (488aa)
gatB; glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XN39_SORCE
GD18-4_B1_scaffold_31931_57
unknown

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comp(65921..66286)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

Displaying items 31-57 of 57 in total

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