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GD18-4_B1_scaffold_345594

Search features with annotation key words

Displaying items 31-60 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_345594_30
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31967..33724
-----------------
DNA (1758bp)
protein (586aa)
Putative uncharacterized protein n=1 Tax=Ustilago maydis (strain 521 / FGSC 9021) RepID=Q4PAD8_USTMA
Uncharacterized protein {ECO:0000313|EMBL:EYF05974.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
PE-PGRS family protein
GD18-4_B1_scaffold_345594_31
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33744..35363
-----------------
DNA (1620bp)
protein (540aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0L9_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39027.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_345594_32
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35367..36188)
-----------------
DNA (822bp)
protein (274aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YA01_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41151.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_345594_33
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36377..37768)
-----------------
DNA (1392bp)
protein (464aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FC64_SORC5
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:EYF06512.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
GD18-4_B1_scaffold_345594_34
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38104..38433)
-----------------
DNA (330bp)
protein (110aa)
Frataxin family protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UGL3_MYXSD
Frataxin protein {ECO:0000313|EMBL:AKF05509.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
frataxin family protein
GD18-4_B1_scaffold_345594_35
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38469..38852)
-----------------
DNA (384bp)
protein (128aa)
Protein ApaG n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F367_SORC5
apaG; ApaG protein
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_345594_36
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38946..39743
-----------------
DNA (798bp)
protein (266aa)
Integral membrane protein TerC n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J7T4_ANAD2
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ACL63426.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
GD18-4_B1_scaffold_345594_37
unknown

Not on your lists

comp(39842..40000)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_38
unknown

Not on your lists

comp(39997..40926)
-----------------
DNA (930bp)
protein (310aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_39
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41094..41615
-----------------
DNA (522bp)
protein (174aa)
YceI n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IPH9_ANADE
hypothetical protein
YceI {ECO:0000313|EMBL:ABC80707.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
GD18-4_B1_scaffold_345594_40
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41668..42612)
-----------------
DNA (945bp)
protein (315aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:AKF10285.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
DNA-formamidopyrimidine glycosylase id=4964310 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GD18-4_B1_scaffold_345594_41
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42616..43437)
-----------------
DNA (822bp)
protein (274aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KDN16016.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KDN16016.1};; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
Enoyl-CoA hydratase n=3 Tax=Amycolatopsis mediterranei RepID=I7CST7_AMYMS
paaG; enoyl-CoA hydratase
GD18-4_B1_scaffold_345594_42
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43685..44203
-----------------
DNA (519bp)
protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GI50_9DELT
FKBP-type peptidyl-prolyl cis-trans isomerase 2-like protein
GD18-4_B1_scaffold_345594_43
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(44888..46411)
-----------------
DNA (1524bp)
protein (508aa)
Short-chain fatty acid transporter id=3182237 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
short chain fatty acid transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
GD18-4_B1_scaffold_345594_44
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

46554..48770
-----------------
DNA (2217bp)
protein (739aa)
hypothetical protein id=12554257 bin=CNBR_ACIDO species=Lewinella persica genus=Lewinella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
GD18-4_B1_scaffold_345594_45
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48924..50252)
-----------------
DNA (1329bp)
protein (443aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GH98_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96431.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_345594_46
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50316..50675
-----------------
DNA (360bp)
protein (120aa)
chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMD0_ANADE
Chorismate mutase AroH {ECO:0000313|EMBL:GAO04244.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
GD18-4_B1_scaffold_345594_47
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50672..51493
-----------------
DNA (822bp)
protein (274aa)
Prephenate dehydrogenase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6S5_ANADF
prephenate dehydrogenase
Prephenate dehydrogenase {ECO:0000313|EMBL:ABS24421.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
GD18-4_B1_scaffold_345594_48
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51844..53058
-----------------
DNA (1215bp)
protein (405aa)
Peptidase U34, dipeptidase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDP8_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:EYF03260.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
peptidase U34, dipeptidase
GD18-4_B1_scaffold_345594_49
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

53055..54656
-----------------
DNA (1602bp)
protein (534aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G6X4_9DELT
N6-adenine DNA/RNA methylase
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
GD18-4_B1_scaffold_345594_50
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

54653..55294
-----------------
DNA (642bp)
protein (214aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TZ27_9DELT
putative metal dependent phosphohydrolase
Putative metal dependent phosphohydrolase {ECO:0000313|EMBL:AIC17116.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
GD18-4_B1_scaffold_345594_51
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55583..56557)
-----------------
DNA (975bp)
protein (325aa)
Putative alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Putative alanine dehydrogenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y487_SORCE
hypothetical protein
GD18-4_B1_scaffold_345594_52
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56619..57551)
-----------------
DNA (933bp)
protein (311aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF04968.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
GD18-4_B1_scaffold_345594_53
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57663..58139
-----------------
DNA (477bp)
protein (159aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S056_9DELT
cysteinyl-tRNA(Pro) deacylase
GD18-4_B1_scaffold_345594_54
unknown

Not on your lists

comp(58215..58595)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_55
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58699..59511)
-----------------
DNA (813bp)
protein (271aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZJ4_HALO1
enoyl-CoA hydratase/isomerase
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_345594_56
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

59545..60756
-----------------
DNA (1212bp)
protein (404aa)
Amidohydrolase n=1 Tax=Paenibacillus polymyxa CR1 RepID=V5X2D6_PAEPO
Uncharacterized protein {ECO:0000313|EMBL:KEO82184.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
amidohydrolase
GD18-4_B1_scaffold_345594_57
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60753..61037
-----------------
DNA (285bp)
protein (95aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFX9_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE71145.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
GD18-4_B1_scaffold_345594_58
unknown

Not on your lists

61551..61685
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

GD18-4_B1_scaffold_345594_59
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61724..62488
-----------------
DNA (765bp)
protein (255aa)
Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXR1_9DELT
Putative transcription regulator protein {ECO:0000313|EMBL:AKF04726.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
MerR family transcriptional regulator
Displaying items 31-60 of 76 in total

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