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GD18-4_B1_scaffold_751943

Search features with annotation key words

Displaying items 31-60 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_751943_31
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(33426..33791)
-----------------
DNA (366bp)
protein (122aa)
ndhC; proton-translocating NADH-quinone dehydrogenase subunit 3 NdhC (EC:1.6.5.3)
NADPH-quinone oxidoreductase n=1 Tax=Nodosilinea nodulosa RepID=UPI000374A70A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
GD18-4_B1_scaffold_751943_32
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33918..34223)
-----------------
DNA (306bp)
protein (102aa)
4Fe-4S ferredoxin n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEE2_SORCE
4Fe-4S ferredoxin
4Fe-4S ferredoxin {ECO:0000313|EMBL:AGP41208.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_751943_33
unknown

Not on your lists

comp(34282..34644)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

GD18-4_B1_scaffold_751943_34
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35021..36283
-----------------
DNA (1263bp)
protein (421aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Serine hydroxymethyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XJT5_SORCE
serine hydroxymethyltransferase
GD18-4_B1_scaffold_751943_35
unknown

Not on your lists

comp(36202..36807)
-----------------
DNA (606bp)
protein (202aa)

This feature has no annotations

GD18-4_B1_scaffold_751943_36
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37114..39048
-----------------
DNA (1935bp)
protein (645aa)
Multi-sensor hybrid histidine kinase id=3644888 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
periplasmic sensor hybrid histidine kinase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
GD18-4_B1_scaffold_751943_37
unknown

Not on your lists

comp(39183..39314)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

GD18-4_B1_scaffold_751943_38
Desulfovibrio piezophilus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39428..41548)
-----------------
DNA (2121bp)
protein (707aa)
Heavy metal translocating P-type ATPase n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WY74_DESPC
Heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCH50183.1}; TaxID=1322246 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30).;"
GD18-4_B1_scaffold_751943_39
unknown

Not on your lists

comp(41554..41817)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

GD18-4_B1_scaffold_751943_40
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41814..42281)
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T5K3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EHJ46414.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
GD18-4_B1_scaffold_751943_41
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42385..43623
-----------------
DNA (1239bp)
protein (413aa)
Amino acid permease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U237_MYXSD
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AGC42273.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
GD18-4_B1_scaffold_751943_42
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43759..44946
-----------------
DNA (1188bp)
protein (396aa)
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCQ2_SORCE
hypothetical protein
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_751943_43
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44966..46765
-----------------
DNA (1800bp)
protein (600aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ERE4_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97287.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_751943_44
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46829..47671
-----------------
DNA (843bp)
protein (281aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9R9_SORC5
tetrapyrrole methylase
GD18-4_B1_scaffold_751943_45
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47860..48966
-----------------
DNA (1107bp)
protein (369aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN90194.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN90194.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKW5_SORC5
GD18-4_B1_scaffold_751943_46
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49281..49553
-----------------
DNA (273bp)
protein (91aa)
Penicillin-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKW8_SORC5
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:EYF02531.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pbp1; penicillin-binding protein
GD18-4_B1_scaffold_751943_47
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49550..51703
-----------------
DNA (2154bp)
protein (718aa)
Penicillin-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKH5_SORCE
penicillin-binding protein
Penicillin-binding protein {ECO:0000313|EMBL:AGP33049.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
GD18-4_B1_scaffold_751943_48
unknown

Not on your lists

51804..52067
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

GD18-4_B1_scaffold_751943_49
Medicago truncatula, Medicago, Fabales, rosids, Streptophyta, Viridiplantae

Not on your lists

52164..52649
-----------------
DNA (486bp)
protein (162aa)
Putative uncharacterized protein n=1 Tax=Medicago truncatula RepID=G7J079_MEDTR
Uncharacterized protein {ECO:0000313|EMBL:KEH32788.1, ECO:0000313|EnsemblPlants:KEH32788}; TaxID=3880 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago.;" source="Medicago truncatula (Barrel medic) (Medicago tribuloides).;"
hypothetical protein
GD18-4_B1_scaffold_751943_50
Vibrio sp. 16, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52650..53402)
-----------------
DNA (753bp)
protein (251aa)
Putative cold-shock DNA-binding domain protein n=1 Tax=Vibrio sp. 16 RepID=B8K7Z1_9VIBR
Putative cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EED27053.1}; TaxID=391586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. 16.;"
GD18-4_B1_scaffold_751943_51
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53557..53991
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFY6_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG72254.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
GD18-4_B1_scaffold_751943_52
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54073..55023
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VL41_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKF08020.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
GD18-4_B1_scaffold_751943_53
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(55132..55992)
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=F4ABG1_CLOBO
hypothetical protein
Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
GD18-4_B1_scaffold_751943_54
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56061..56387
-----------------
DNA (327bp)
protein (109aa)
HipA N-terminal domain protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q5C0_9RHOO
HipA N-terminal domain protein
HipA N-terminal domain protein {ECO:0000313|EMBL:BAL27183.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
GD18-4_B1_scaffold_751943_55
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56506..56754
-----------------
DNA (249bp)
protein (83aa)
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_751943_56
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56820..57134
-----------------
DNA (315bp)
protein (105aa)
twitching motility protein PilT n=1 Tax=Actinomyces oris RepID=UPI0002003BBC
PilT protein domain-containing protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
GD18-4_B1_scaffold_751943_57
unknown

Not on your lists

comp(57377..58720)
-----------------
DNA (1344bp)
protein (448aa)

This feature has no annotations

GD18-4_B1_scaffold_751943_58
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58734..60020)
-----------------
DNA (1287bp)
protein (429aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GFA6_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93124.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
GD18-4_B1_scaffold_751943_59
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60017..61768)
-----------------
DNA (1752bp)
protein (584aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV47_SORCE
hypothetical protein
GD18-4_B1_scaffold_751943_60
unknown

Not on your lists

comp(62068..62403)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

Displaying items 31-60 of 97 in total

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