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GD18-4_B1_scaffold_173798_28

Organism: GD2018-4_B1_QB3_180703_Deltaproteobacteria_71_13

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(29892..30137)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion protein, HrpO family n=2 Tax=Acidovorax citrulli RepID=A1TJB7_ACIAC similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 71.0
  • Bit_score: 72
  • Evalue 2.10e-10
HrpO family type III secretion protein similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 71.0
  • Bit_score: 72
  • Evalue 6.00e-11
HrcS {ECO:0000313|EMBL:AAW81015.1}; TaxID=80869 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (Acidovorax avenae subsp. citrulli).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 71.0
  • Bit_score: 72
  • Evalue 3.00e-10

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Taxonomy

Acidovorax citrulli → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGACGCGCCGTTCGCCCTCGCGCGCGAAGCGCTGGTGCTGGCCACCGCGCTGAGCCTGCCGATCGTGGCGGTCGCCGCGATCGTCGGGCTGTTCGTGTCGGCGCTGCAGAGCGCGACGAGCCTGCAAGACGCGGCGCTCGCGCACCTGCCCAAGCTGCTCGCCGTCGCCGTTGCGACCGCGATCACCGCGCCGTGGATGGCGCGCACGCTCGTCGCGTTCGCGACGCGGGCCTTCGGCGGCTGA
PROTEIN sequence
Length: 82
MDAPFALAREALVLATALSLPIVAVAAIVGLFVSALQSATSLQDAALAHLPKLLAVAVATAITAPWMARTLVAFATRAFGG*