ggKbase home page

GD18-4_B1_scaffold_6998_1

Organism: GD2018-4_B1_QB3_180703_Uhrbacteria_48_14

near complete RP 41 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(614..1909)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKR31663.1}; TaxID=1618642 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_39_8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 443.0
  • Bit_score: 523
  • Evalue 1.50e-145
RNA polymerase sigma factor id=2110492 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 448.0
  • Bit_score: 516
  • Evalue 2.30e-143
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 388.0
  • Bit_score: 380
  • Evalue 4.20e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_OD1_39_8 → Falkowbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAAATCTTCAAAAAAAATGGCAAAAAAGAAGAAACCGGCTCCCGTGGCTAAAAAGGTAAAAAAACAAAAGAAAAAAGCGTCCAAAAAGATTTCACGCCTCAAGAAATCGGCTAAAAAGCTATCAAAAAGGGAAGCGCCGAAACGTGTCGTCGGTACCAAGAAGAAGAAGGAGATAGCTGTAGCGGCGCCCCAATTTCCCGTGCAATCGGTGACAGAGATGGTGATTGAAAAGGGACGGTCACGTGGATTTCTCACGGAAGATGAAGTTCTGTATTACTTTCCCGATCTCGAAGAATACGAGGAAAAGTATGAGGATTTTCTTGACGAACTCGAAGAGCACGGCGTACAAGTGCTCGACAAACGATCCAGTCTGCTCGAGCCTGCTCCGGTTGCAGCCGCGTCACGGACGTCCAAACAATCTCTTCGCGTATCGGCGGCGGTCGCTTCGCGCATTGATTTATCGGATATTTCAGCTGACTCTATTCAGATGTATTTGCGTGAGATCGGAAAGGTGCCACTGCTCACCGGCGATGAGGAAATCCAGCTTGCAAAGCGTAAGGATAAAGGAGACAAGGAGGCGGAGCGGCGCTTGATCGAAGCGAATTTGCGCCTCGTGGTATCTATCGCGAAAAAATTTGCGGATAAAAACTTATCCCTTCTTGATTTGATTCAGGAGGGGAATATGGGATTATTTCGCGCGGTGCAGAAATTCGACTATCGGAAGGGGTATAAATTTTCTACCTACGCGACTTGGTGGATCCGACAAGCGATTACGCGCGCGCTTGCGGACCAATCCCGTACGATCAGGATACCCGTGCATATGGTTGAGACAATCAATCGTTTTCACCATATTCAACGGCAGCTCATTCAGGACCTCGGCCGTGAGCCGATGCCGGAGGAGATTGCCGCGGAAATGGGAGAGACGGTCGATAAGGTGCGGCATATCATTAAAATCAATCAAGATACGATTTCTATTGATACTTCGGTAGGGGATGATGACGAGAACAGCACGCTTGAAGATTTTATCGAGGATTTGCGCACGATTTCACCGGATCGCGCGGCCGCATTGCAGATTCTTAAGGAAAAGATGCAGGAGATTATCGGCACGCTTCTCCCGCGCGAGCAAAAGATATTAGAGATGCGATTCGGTCTTGCCGACGGCGTGTCGCATACGCTTGAAGAGGTCGGTGAGGAATTTGGCGTGACACGTGAGCGCATCCGCCAGATCGAAGCAAAAGCGCTCGACAAAATAGCGAAACTTGTCGGTGTTGAGCGGTTGAGAGATTATTTGTAA
PROTEIN sequence
Length: 432
MKSSKKMAKKKKPAPVAKKVKKQKKKASKKISRLKKSAKKLSKREAPKRVVGTKKKKEIAVAAPQFPVQSVTEMVIEKGRSRGFLTEDEVLYYFPDLEEYEEKYEDFLDELEEHGVQVLDKRSSLLEPAPVAAASRTSKQSLRVSAAVASRIDLSDISADSIQMYLREIGKVPLLTGDEEIQLAKRKDKGDKEAERRLIEANLRLVVSIAKKFADKNLSLLDLIQEGNMGLFRAVQKFDYRKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINRFHHIQRQLIQDLGREPMPEEIAAEMGETVDKVRHIIKINQDTISIDTSVGDDDENSTLEDFIEDLRTISPDRAAALQILKEKMQEIIGTLLPREQKILEMRFGLADGVSHTLEEVGEEFGVTRERIRQIEAKALDKIAKLVGVERLRDYL*