ggKbase home page

B_1_S1_Biohub_coassembly_k141_2451266_9

Organism: B_1_S1_Biohub_coassembly_Liptonbacteria_53_280

near complete RP 17 / 55 BSCG 44 / 51 ASCG 9 / 38 MC: 1
Location: 5488..6375

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 21..40 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 299.0
  • Bit_score: 143
  • Evalue 2.70e-31
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 302.0
  • Bit_score: 209
  • Evalue 5.70e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_12_48_26 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGAAAATCTCTTCCTATCTTTCCGATTCCGAACGGGTCCGCCAGCGGCGAAGGTACCGTTTCTTCGCGATGTGCGGTTTCGGAGTTTTGGGATTGCTTCTTATCGGCGCCGTATGGCTCGTGTGGTATTCCCCCCTCCTCGAAGTACGGAAGGTGGTGGTAGAAGGGAACGTGCGCGTTTCAACTGAAACGGTGCTTGATGTGGCGAAGGGAATTGTGTTTCAAGGAAACTTCGCGAAGTTTCTCGGTATTAACCGTATGTTTGCATGGCCGGAGTTTGCGCGGGAAAACATTACTTTACTTCCTGCGGTGGCGAGCCTCACCATTTCTAAAAGTTATGCTACGCGGACCGTGCGGGTACAGGTAACAGAACGGGTACCGGTAGGGGTGTGGTGTCTCTTTCCAGCGCGGAACTATGCAGACGGGACGCAGACGGACGCAGAAGGGGGATCGGTTGCCGCGGACGCTACTCCGCGTGATTCCGCGCCGGGAGGATGCTGGTGGTTCGACAAAAGCGGAGTACTTTTCGCGCGGGCGCTCGACGGAGAAGGAGGATTGCTTAAGACCGTCCATGATTATTCGGGCCGGACGCTTGGCATCGGATCGGTGGCATTGCCCTCTCATCTGATGGGCAATCTTCTTGAGATATTCTTGGTGCTTCGTGAGAGCGGTGCGGTGGCGGGCGAGGTGCGGCTTGAGGACCTCTCTCGCGAAGAAGTAGAAGTCGTGACGCTCAATGGTCCCCGCTTGTACTTCAGTTTGCGGTTCCCGCTCGCCGCCATCGCCGATGCGGTCCGGCAGATTTTCTCGGAGTCGGGGCAATTCCCGCACCCGCAAAAGCTGCAGTATGTGGATTTCAGGGTGGAGAACAGGGTGTACTATAAGTAG
PROTEIN sequence
Length: 296
MKISSYLSDSERVRQRRRYRFFAMCGFGVLGLLLIGAVWLVWYSPLLEVRKVVVEGNVRVSTETVLDVAKGIVFQGNFAKFLGINRMFAWPEFARENITLLPAVASLTISKSYATRTVRVQVTERVPVGVWCLFPARNYADGTQTDAEGGSVAADATPRDSAPGGCWWFDKSGVLFARALDGEGGLLKTVHDYSGRTLGIGSVALPSHLMGNLLEIFLVLRESGAVAGEVRLEDLSREEVEVVTLNGPRLYFSLRFPLAAIADAVRQIFSESGQFPHPQKLQYVDFRVENRVYYK*