ggKbase home page

B_1_S1_Biohub_coassembly_k141_2079136_22

Organism: B_1_S1_Biohub_coassembly_Chloroflexi_54_266

near complete RP 44 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: 21162..21788

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator Tax=Nocardiopsis halotolerans RepID=UPI00034881F0 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 207.0
  • Bit_score: 186
  • Evalue 2.00e-44
Marine sediment metagenome DNA, contig: S12H4_C00636 {ECO:0000313|EMBL:GAI67093.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 209.0
  • Bit_score: 297
  • Evalue 8.60e-78
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 207.0
  • Bit_score: 179
  • Evalue 9.00e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 627
ATGGACACAATTCGGATACTTCTGGTAGATGACCACCAGGTTGTGCGCGAAGGGCTGAGGCGTATGCTGGAGCTCGAGCCGGACCTCAAGATAGTCGGTGAAGCGTCAAACGGGAAAGAAGCACTCGAACAGGTGGACAGGATATCTCCGGAGGTCGTCCTCATGGATATCAAGATGCCGGGGATGGACGGAATAGAGCTCACCAGGAAGCTCAAAGACAAATGTCCTGACTGCCACGTGCTCATGCTGACGCTGTACGATGAATACCTCCACCAGGCAATCGAAGCCGGGGCGACAGGCTACCTGCTCAAAGACATCAACCGCGAGGAACTGTTGAAGGCGATCCGGTCCGTTCGGGAGGGGCGCTCGCCGCTTTACATGTCGCTTCCGCCAGACCGGCTGGCGAAACTTACCACTCCCGAGTCCCAGCAGAAGACAAACCTCTCCGAAAGGGAACTAACTATCCTGCGGCTGATAGCCGATGGCGTCACGACCGAAGGCATCGCTCACCAGCTTTTTCTGAGTGAGGCCTCCGTAAAGCGAAGCGTCCACATTATCTTTGACAAGCTGACGGTTCGCAACCGCTCTGAAGCGGTGGCCGAAGCCTACCGACGGGGAATAATATAG
PROTEIN sequence
Length: 209
MDTIRILLVDDHQVVREGLRRMLELEPDLKIVGEASNGKEALEQVDRISPEVVLMDIKMPGMDGIELTRKLKDKCPDCHVLMLTLYDEYLHQAIEAGATGYLLKDINREELLKAIRSVREGRSPLYMSLPPDRLAKLTTPESQQKTNLSERELTILRLIADGVTTEGIAHQLFLSEASVKRSVHIIFDKLTVRNRSEAVAEAYRRGII*