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B_1_S1_Biohub_coassembly_k141_4769525

Search features with annotation key words

Displaying items 61-86 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4769525_58
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(62646..63575)
DNA (930bp) protein (310aa)
pth:PTH_1417 trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
thioredoxin reductase
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_4769525_59
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(63600..63908)
DNA (309bp) protein (103aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000380B20B
thioredoxin
Tax=RBG_16_Chloroflexi_50_11_curated
B_1_S1_Biohub_coassembly_k141_4769525_60
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(63854..64993)
DNA (1140bp) protein (380aa)
Phosphate acyltransferase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KG56_9FIRM
fatty acid/phospholipid synthesis protein PlsX
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4769525_61
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(65108..65698)
DNA (591bp) protein (197aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_4769525_62
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65829..66227)
DNA (399bp) protein (133aa)
Fe-S iron-sulfur cluster assembly protein NifU family Tax=Eubacterium sp. CAG:161 RepID=R5LCI9_9FIRM
Fe-S iron-sulfur cluster assembly protein NifU family {ECO:0000313|EMBL:CCY70697.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
FeS cluster assembly scaffold protein NifU
B_1_S1_Biohub_coassembly_k141_4769525_63
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66250..67434)
DNA (1185bp) protein (395aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Cysteine desulfurase Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX91_MAHA5
B_1_S1_Biohub_coassembly_k141_4769525_64
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(67544..68680)
DNA (1137bp) protein (379aa)
hypothetical protein bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
protease
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4769525_65
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(68695..69138)
DNA (444bp) protein (148aa)
Ubiquinone/menaquinone biosynthesis methyltransferase (UbiE) Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AE84_PYRYC
ubiquinone/menaquinone biosynthesis methyltransferase
Tax=CG_Anaero_02
B_1_S1_Biohub_coassembly_k141_4769525_66
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(69347..70189)
DNA (843bp) protein (281aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Chloroflexi_53_26_curated
B_1_S1_Biohub_coassembly_k141_4769525_67
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(70196..71323)
DNA (1128bp) protein (376aa)
Ornithine decarboxylase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ornithine decarboxylase
Tax=RBG_13_Chloroflexi_54_8_curated
B_1_S1_Biohub_coassembly_k141_4769525_68
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

71661..72602
DNA (942bp) protein (314aa)
hypothetical protein Tax=Bacteria RepID=UPI000378CFC9
ABC transporter
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4769525_69
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

72599..73312
DNA (714bp) protein (238aa)
hypothetical protein Tax=Bacteria RepID=UPI00035E387E
ABC-2 type transporter
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4769525_70
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

73312..74937
DNA (1626bp) protein (542aa)
hypothetical protein Tax=Bacteria RepID=UPI0003659799
gliding motility ABC transporter auxillary protein
Tax=RBG_13_Chloroflexi_54_9_curated
B_1_S1_Biohub_coassembly_k141_4769525_71

Not on your lists

74990..75538
DNA (549bp) protein (183aa)
hypothetical protein Tax=Bacteria RepID=UPI000360B8FD
Marine sediment metagenome DNA, contig: S01H1_S10518 {ECO:0000313|EMBL:GAG02483.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_4769525_72
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

75564..76796
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000378F088
competence/damage-inducible protein CinA
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_4769525_73
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76871..78259
DNA (1389bp) protein (463aa)
major facilitator superfamily protein bin=GWC2_Syntrophus__56_31 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
sugar phosphate permease
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_4769525_74
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78256..79536
DNA (1281bp) protein (427aa)
major facilitator superfamily protein bin=GWC2_Syntrophus__56_31 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
sugar phosphate permease
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_4769525_75
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79533..80804
DNA (1272bp) protein (424aa)
major facilitator superfamily protein bin=GWC2_Syntrophus__56_31 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
oxalate/formate antiporter
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_4769525_76
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80808..82085
DNA (1278bp) protein (426aa)
major facilitator superfamily protein bin=GWC2_Syntrophus__56_31 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
major facilitator superfamily MFS_1
Tax=GWC2_Syntrophus_56_31_curated
B_1_S1_Biohub_coassembly_k141_4769525_77
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82130..83389
DNA (1260bp) protein (420aa)
major facilitator superfamily protein bin=GWC2_Syntrophus__56_31 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
major facilitator superfamily permease
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_4769525_78
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(83386..86625)
DNA (3240bp) protein (1080aa)
hypothetical protein Tax=cellular organisms RepID=UPI00037FD67B
von Willebrand factor type A
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_4769525_79
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(86622..87236)
DNA (615bp) protein (205aa)
NUDIX family hydrolase bin=RBG_19FT_COMBO_GAL15_69_19 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
coenzyme A pyrophosphatase
Tax=RBG_13_Chloroflexi_54_8_curated
B_1_S1_Biohub_coassembly_k141_4769525_80

Not on your lists

comp(87289..88188)
DNA (900bp) protein (300aa)
hypothetical protein Tax=cellular organisms RepID=UPI0003730FD4
Uncharacterized protein {ECO:0000313|EMBL:KKK77292.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATPase
B_1_S1_Biohub_coassembly_k141_4769525_81
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(88178..88798)
DNA (621bp) protein (207aa)
dephospho-CoA kinase (EC:2.7.1.24)
hypothetical protein Tax=cellular organisms RepID=UPI000360FF0C
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_4769525_82
unknown

Not on your lists

89156..89512
DNA (357bp) protein (119aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4769525_83
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

89515..90606
DNA (1092bp) protein (364aa)
Glycosyl transferase, group 1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHP1_KORVE
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABF43609.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying items 61-86 of 86 in total

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