ggKbase home page

B_1_S1_Biohub_coassembly_k141_3402388_4

Organism: B_1_S1_Biohub_coassembly_Chloroflexi_53_56

near complete RP 16 / 55 BSCG 49 / 51 ASCG 8 / 38
Location: comp(4499..5269)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter Tax=Dehalococcoides sp. (strain GT) RepID=D3SHR4_DEHSG similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 249.0
  • Bit_score: 273
  • Evalue 1.50e-70
Marine sediment metagenome DNA, contig: S06H3_C01587 {ECO:0000313|EMBL:GAH97948.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 243.0
  • Bit_score: 319
  • Evalue 2.60e-84
ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 249.0
  • Bit_score: 273
  • Evalue 4.30e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 771
ATGACGCTCCCAGAGGTCTCTCGTCGTTCGTACAGGATGTGGCAACGAAACAGGGATGTTTTCCTGCGCCTCTGGAAAGCGGAGCTGGTGCCCTTTGTGGCCGAGCCTCTCATAATTCTAGCGGCCATGGGCTTTGGACTGGGCGGACTTGTTGGAAAAGTCAACGGGCAAAGCTATCTGGCGTTTGTCGCCCCAGGAGTCCTGGCCAGCTACGTTATGTTCGCTGCCGCCTTCGAATGCACCTACGGCACATATGTGAGGATGGAGCGACAGCGAACATTCGATGCCATAATAGTTACACCGCTGAGCATAGAGGACGTCATTACAGGGGAGATACTGTGGGGGGCAACCCGCTCCTTTTTGACGGCCTGCGCCATTCTTGTGGTCATTCTCATATTCGGGCTTGTGCCATCACCCTACGCCGCCATCATCCCCGTTCTCGCCATCCTGGAGGGGCTGATGTTCTCCTCCATCTCCGTTTTCTTCACCTCTCTTGCTCCCTCCATATACTTTTTCAACTACTTCTTCACCCTCTTCATCACACCCATGTTTTTCTTCAGCGGCGTTTTCTTCCCCATATCCAGGCTTCCCGAGGTAATCCAGACGATGACCTGGATGCTGCCTCTAACGCCAGCAGCACATGCAATGCGAGAGCTCCTCTGGGGGCAGTGGAGCTGGGGGGTGTTTGCCGCTATGGCCTGGATCCTCGGTGTAACCCTCGTCTTTTTCTACCTCTCCTTGATTTTCATGAGGCGCAGACTCATAAAGTAG
PROTEIN sequence
Length: 257
MTLPEVSRRSYRMWQRNRDVFLRLWKAELVPFVAEPLIILAAMGFGLGGLVGKVNGQSYLAFVAPGVLASYVMFAAAFECTYGTYVRMERQRTFDAIIVTPLSIEDVITGEILWGATRSFLTACAILVVILIFGLVPSPYAAIIPVLAILEGLMFSSISVFFTSLAPSIYFFNYFFTLFITPMFFFSGVFFPISRLPEVIQTMTWMLPLTPAAHAMRELLWGQWSWGVFAAMAWILGVTLVFFYLSLIFMRRRLIK*