ggKbase home page

S_p1_S3_coassembly_k141_1233057_12

Organism: S_p1_S3_coassembly_Parcubacteria_45_229

partial RP 27 / 55 BSCG 37 / 51 MC: 1 ASCG 9 / 38
Location: comp(9996..11876)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein, partial Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374F259 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 456.0
  • Bit_score: 760
  • Evalue 1.30e-216
Ribocuclease J similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 563.0
  • Bit_score: 486
  • Evalue 1.00e-134
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 561.0
  • Bit_score: 666
  • Evalue 2.10e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1881
ATGAATTATAATCCATCCATGTCGGGCAAGATGTTTTTTAGGACATCTAATAATCAGCAAAATTATTCTCGCCGGCCCAATCCCAATCGCCGTGGATCTAGTCGCCCATCTGGCGGGCCAAACCGATCCGGCAACCGTCCGGATAATTTCGGCCGGATGCCGGAAAACGAACAAGATGAACGTTCATCAAAACCGCAGCAAAACTGCCTGCGGATTATTCCCTTGGGCGGTTTAGGCGAAGTCGGCCGAAACATGACCGTTATTGAATGGCGTGATTACGAACGGGATGATCGCGATATTTTGTTGGTGGATGCCGGTGTCAGATTTCCCGAGGAAGACATGCCCGGTATAGACCTGATAATACCCAATATAAAATACCTGGAAGACAAAGCCGACAAAATCAGCGGTATGGTTTTTACGCACGGCCATTTTGACCATATCGGCGCCCTGCCTTATATTCTGGAAAAAATAAGAAACCCTATGATCTATGCCGCGCCGCTGACTCGTGGCCTTATAGTTAAAAGGCACGACGAATTTAAACACCTGCCCAAACTGCAAATAGACGAAATAAAAAGCGGAGAAAAAAGAAAAATCGGAATTTTTGAAGTGGAATTTATCCATATCAATCACAGCATTCCCGACGATATGGCTTTATTGATCAAAACTCCGGCCGGCCAGATTATGTGCACTTCGGATTTTAAGTTTGACCACAGTCCGGTTATAGACAAACCGGCCGAAATAGACCGCCTGCGAAAAATCGGCGACGACGGCCTGCTGCTTTTAATGTCCGACAGCACCGGCGCCGAAGAACCCGGGCACTCCATATCTGAATCCGACATTCAGGTTAATTTGGAAAAATTGATCGCCGAAGCGCCGGGCCGCGTCATTGTGGGCATGTTCGCTTCGGCTATAAATCGCGTCCAGCAAATTATAGCCATTTCCGAAAAATACGGACGCAAAGTGGTGGTGGAGGGCTTTAGCATGAAAGCCGCCGTGGAGGTTTCTAAAGTTTTGGGCTACATCAAAACCAAAAAAGGCACTTTGATTTCGGCTGCGGAAAGCAATAAATACGCCGACAATAAAATAACCATATTGGGCACGGGCGGGCAGGGCGAGGAAAACGCGGTTTTGATGCGCCTAGCCACCCATCGCCATAAGCAACTGGAACTTAAAAAGGGCGACACTATTATTTTTTCTTCTTCCATTATTCCCGGCAACGAACGCACCATCCAGCACTTAAAAGACAATCTGCTTAGGCACGGCGTTAAGGTCTATAATTATAAAATGCTGGATATTCACGCCGGCGGCCACGGCCACCAGGACGATTTGATGTATATGCTGGAACTGGTGCGGCCCAAATTTTTAATGCCGGTCCACGGCCAGCTTTCCATGTTGTTCGCCATGAAAGACCTGGGCTTAAAAGCGGGTATGCCCGAAGATAACATCACTGTGGTGGAAAACGGCAATGTGGTCAGAATCACCTCGGATTCAATCTCGGTGGACAAAAAATCGGTGCCGGCTGAACTGGTTATGGTGGACGGCTTGGGCGTGGGCGACGTCGGTTCCGTGGTTTTGCGTGACCGCCAAATGCTGGCCGAGGACGGGATGTTTATGGTGGTGGCGGTGGTGGATGCGCGAACCGGCCGGGTGCGCAGCAGCCCCGACATCATCTCGCGCGGCTTTATTTATTTGCGCGACAACAAACAGATGCTTCAAGACGCCCGCATCATCATCAGAAAAACAATAGAAAGATCCACCGCCGGCGAACACCCTTTTAACGACGCCTTGGTGAAAGAAGAAATCAGGGAACGTTTGGGTCAATTCTTGTTCCAAAAAACCCACCGCCGGCCCATGATCCTGCCGGTCTTGATTCAGGTGTAA
PROTEIN sequence
Length: 627
MNYNPSMSGKMFFRTSNNQQNYSRRPNPNRRGSSRPSGGPNRSGNRPDNFGRMPENEQDERSSKPQQNCLRIIPLGGLGEVGRNMTVIEWRDYERDDRDILLVDAGVRFPEEDMPGIDLIIPNIKYLEDKADKISGMVFTHGHFDHIGALPYILEKIRNPMIYAAPLTRGLIVKRHDEFKHLPKLQIDEIKSGEKRKIGIFEVEFIHINHSIPDDMALLIKTPAGQIMCTSDFKFDHSPVIDKPAEIDRLRKIGDDGLLLLMSDSTGAEEPGHSISESDIQVNLEKLIAEAPGRVIVGMFASAINRVQQIIAISEKYGRKVVVEGFSMKAAVEVSKVLGYIKTKKGTLISAAESNKYADNKITILGTGGQGEENAVLMRLATHRHKQLELKKGDTIIFSSSIIPGNERTIQHLKDNLLRHGVKVYNYKMLDIHAGGHGHQDDLMYMLELVRPKFLMPVHGQLSMLFAMKDLGLKAGMPEDNITVVENGNVVRITSDSISVDKKSVPAELVMVDGLGVGDVGSVVLRDRQMLAEDGMFMVVAVVDARTGRVRSSPDIISRGFIYLRDNKQMLQDARIIIRKTIERSTAGEHPFNDALVKEEIRERLGQFLFQKTHRRPMILPVLIQV*