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S_p1_S3_coassembly_k141_19604_4

Organism: S_p1_S3_coassembly_Lambdaproteobacteria_69_214

partial RP 39 / 55 BSCG 39 / 51 ASCG 9 / 38 MC: 3
Location: comp(3080..4768)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002EDB166 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 581.0
  • Bit_score: 578
  • Evalue 4.90e-162
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 341.0
  • Bit_score: 319
  • Evalue 1.50e-84
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 574.0
  • Bit_score: 568
  • Evalue 9.20e-159

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Taxonomy

RIFOXYD2_FULL_Proteobacteria_50_16_curated → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGGCGCTGAACCTGAAACTTCAGATGCGGCTGAGCCAGCAGCTCATCATGACGCCGCAGCTCCAGCAGGCCATCAAGCTGCTCCAGCTTTCCCGCAACGAGCTGGAGGAGCTGATCGAGCAGGCGCTGGTCGAGAACCCCGTGCTGGAGGAGGGCGCCGACCCCGCGGAGCCGGAGCCGGCCACGGAGGAGCCCATCGCCGCCAGCCAGACCGTCGATGCCGCCGAGGACGTGGCGACCGAGGCCGGCCATCCCGAGAACGACCTGGAATGGCAGCAGTACGTCGCCTCCGGCAGCGGCGTGATCGCGGAACGCTCGCCGCGCGGCGATGACGACGCCCCCGGCATCGAGGCCACCCTGGCCGACGCCGATACGCTGCGCGACCACCTGATGTGGCAGCTCGAGATGGCGCCGCTCAGCCCGATCGAGATGGAGATCGGCGAGCACCTGATCGGCAACCTCGACGACGACGGCTATCTCACCCTGAGCGTGCAGGAGCTGCTGGAGCTGAACCCCGATCTGCACCGGCGCATCGAGCAGGGGTTGCGGAAGGGCCAAACCCACCTGCCGCCTCCCGCCGACTGCGACCCGGGCGTGTTCACGAGCAAGCACGCCTCCGCTCAGCCGCTGGAGACCAGCCGCGGCCGGAAGAAGAAGAAGGCGCCGCCCACGTTCGTCGAAGAGGAGGCGGCGCCGGCCCCGCCAGCGGCCGATCCCATCAAGGTCAGCCCCAAGGCCTGCGGCGCAGTGGAGGCCGTGCTGCGGTACTTGCAGACCTTCGACCCGATCGGCGTCGGCGCACGCGACCTGCGCGAGTGTCTGGAAATCCAGCTCCGGGCGATGGGGCTGGCGGAGGCGCTCCCGCTGCGCATCGTGCACAACGACCTGAAGCTGCTGGAAAACAAGGACCTGCGCCGGATCGCCCGCCGCAACAAGGTCGAGGTCGAGGAGGTCGTCGAGGCGTACAAGTTGATCATCTCCCTCGAGCCCAAGCCGGGCCGGCCCTACAGCGGGGAGCGCCCGCAGCACATCATCCCCGACGTGTTCATCTTCAAGTTCAGCGATACCGCCACGGAGGCCGAGGATCGCGTGGGGCAGTACCGGATCGTGCTCAACGAGAGCGGCCTGCCCCGGCTGCGCATCAACGATTTCTACCGCGACCTGGCCGAGCGCAGCGCCCGCGATTCCTCGCTCACCCAGGAGTACATCGTCGAGAAGATCAAGGCGGGCAACTGGCTGATGAAGAGCATCGAGCAGCGCCAGAAGACGATCTTCCGGGTCACCAAGAGCATCCTCAAGCACCAGTACGAGTTCTTCGAGAAAGGCATCAGCTTCCTGCGGCCGCTGGTGCTGAAGGACGTGGCGGAGGACATCGGCGTCCACGAATCCACGGTCAGCCGCATCACCACCAACAAGTACGCGCACACCCCGCAGGGCATCTACGAGCTGAAGTACTTCTTCACCAGCGGGATCGACCAGGGTCAGGGCGAGGTCATCTCCTCGAAGAAGATCAAGGACATGATCCAGAAGATCATTGCCGCCGAGGACAACCGCGAACCCCTCACCGATATCCAGATCGCCGAGCGGCTCTCCAAGGCCAACAACATCAAGGTCGCCCGGCGCACCGTCGCCAAGTATCGCGAGGCCTTGAACCTGCTCCCCTCGAACAAGCGCAAGCAGTTGTTCTGA
PROTEIN sequence
Length: 563
MALNLKLQMRLSQQLIMTPQLQQAIKLLQLSRNELEELIEQALVENPVLEEGADPAEPEPATEEPIAASQTVDAAEDVATEAGHPENDLEWQQYVASGSGVIAERSPRGDDDAPGIEATLADADTLRDHLMWQLEMAPLSPIEMEIGEHLIGNLDDDGYLTLSVQELLELNPDLHRRIEQGLRKGQTHLPPPADCDPGVFTSKHASAQPLETSRGRKKKKAPPTFVEEEAAPAPPAADPIKVSPKACGAVEAVLRYLQTFDPIGVGARDLRECLEIQLRAMGLAEALPLRIVHNDLKLLENKDLRRIARRNKVEVEEVVEAYKLIISLEPKPGRPYSGERPQHIIPDVFIFKFSDTATEAEDRVGQYRIVLNESGLPRLRINDFYRDLAERSARDSSLTQEYIVEKIKAGNWLMKSIEQRQKTIFRVTKSILKHQYEFFEKGISFLRPLVLKDVAEDIGVHESTVSRITTNKYAHTPQGIYELKYFFTSGIDQGQGEVISSKKIKDMIQKIIAAEDNREPLTDIQIAERLSKANNIKVARRTVAKYREALNLLPSNKRKQLF*