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S_p1_S3_coassembly_k141_1867813_25

Organism: S_p1_S3_coassembly_Lambdaproteobacteria_69_214

partial RP 39 / 55 BSCG 39 / 51 ASCG 9 / 38 MC: 3
Location: 28844..29488

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WAC8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 188.0
  • Bit_score: 146
  • Evalue 3.10e-32
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 188.0
  • Bit_score: 146
  • Evalue 4.30e-32
algU; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 188.0
  • Bit_score: 142
  • Evalue 9.60e-32

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Taxonomy

Alcanivorax hongdengensis → Alcanivorax → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGTCGGAAGCTTCGGCCGGGGCCGCACCCACCGATTGGTACGGCCTCGACGACGAAATCTTGATCAAAGCCCATCTGCGCGGCGACGAGCACGCCTTCGAGGTGCTGTTCAAGAAACACCGCGACCGCATCGCGCGGCTGGTGTTCTCCATCGTCAAGGATGAGGATTTGGCCGAGGACATCGTGCAGGAGGTGTTCCTCCTGGTATACCGGAGTCTGCCCAGGTTCCGGGGGGATGCCGCTTTCAAGACCTGGATCTACCGGATCGCGGTGAACGAGGCCGTCCGGCAGGCCCAGTTGTCCAAGCGCTGGAAGCCATTGCCCGAGGATTATGCCGAGGAGGGCACCATCCCCTCCATGATCGTCGTGTTGAACAACGGCGACTCCCCGGAGCGGTTGATGGTGGAGGGCCAGCAACGTGCATTGATCCACCAGGCGTTGGATGCCCTCAAGCCGCCGCACCGGGCGATCCTGACCATGCACTACCTCGAGGACCTGTCCGTGGAAGAGATCGCCCGGATCCTGGAAATCCCCCAAGGCAGCGTCAAGTCGCGGCTGTTCTACGCGCGGGAGAATCTGAAGAAGGCCCTCCAGCCCCTGCTGGGGGACTTTGAAGCCGCAGGAAGAGGATCACATGCACTGTGA
PROTEIN sequence
Length: 215
MSEASAGAAPTDWYGLDDEILIKAHLRGDEHAFEVLFKKHRDRIARLVFSIVKDEDLAEDIVQEVFLLVYRSLPRFRGDAAFKTWIYRIAVNEAVRQAQLSKRWKPLPEDYAEEGTIPSMIVVLNNGDSPERLMVEGQQRALIHQALDALKPPHRAILTMHYLEDLSVEEIARILEIPQGSVKSRLFYARENLKKALQPLLGDFEAAGRGSHAL*