ggKbase home page

S_p1_S3_coassembly_k141_2011865_9

Organism: S_p1_S3_coassembly_Woesearchaeota-II_31_108

near complete RP 33 / 55 MC: 2 BSCG 23 / 51 ASCG 32 / 38
Location: comp(6411..7088)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW {ECO:0000313|EMBL:KKQ56037.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.1
  • Coverage: 196.0
  • Bit_score: 96
  • Evalue 3.10e-17
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 188.0
  • Bit_score: 90
  • Evalue 4.50e-16
RNA polymerase sigma factor, sigma-70 family; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 29.6
  • Coverage: 179.0
  • Bit_score: 90
  • Evalue 1.20e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_OD1_38_13 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGGAAGCACAAAGTGATTTAGAAGAAATAGTGATTAAAGCAAAGCAAGGGGATCAAGCTGCCTTTTCATCATTATATAAAGAATATTCACCACAAGTATTTGGATATCTTCAAACTTTACTTTTTAAATTTCGTCTTAATAATCCAAGAGATCATGCAGAAGACTTAACACAAAAAACTTTTATTTTAGCATATCAAAAAATTTCTGATTTAAAGGATGAAAGTAAATTTATAAATTGGGTTTATAGAATAGCTAGAAATGAAGCATATCAACTTATGAGAAGAGAAAGAAAAATAAATCAAGAATTAAATTTAGATGACTTAGGTAAGGATAGTTTATATCTTCGTGATACTAGGGCTATCCCTGGAGATAAAATAAGAATTGATGAATATTCTAAATTGTTGAATCGTTCTTTAAATAGGGTACATAGAAATTATAGACCTATATTGATAGACAGAATCATAAATAACTTAAGTATAGCAGAGATTTCTAGATCTAGGAAAATGAATCCTAATACTCTAAGAGCCAATTTAGCTAGGGGCAAAAAAAATTTAATTGTAAATTATGAAGAGGAAGTTTTATCCAACGGAACTGATTTTCCAAGTATAGAAAGATATATTAGGTTTAGAGTTAGGAAAGATATTAATTCTCAATCTGGCCCCAGCCAATCAATCTAA
PROTEIN sequence
Length: 226
MEAQSDLEEIVIKAKQGDQAAFSSLYKEYSPQVFGYLQTLLFKFRLNNPRDHAEDLTQKTFILAYQKISDLKDESKFINWVYRIARNEAYQLMRRERKINQELNLDDLGKDSLYLRDTRAIPGDKIRIDEYSKLLNRSLNRVHRNYRPILIDRIINNLSIAEISRSRKMNPNTLRANLARGKKNLIVNYEEEVLSNGTDFPSIERYIRFRVRKDINSQSGPSQSI*