ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

S_p1_S3_coassembly_k141_387721_24

Organism: S_p1_S3_coassembly_Woesearchaeota_57_86

near complete RP 30 / 55 MC: 2 BSCG 20 / 51 MC: 1 ASCG 35 / 38 MC: 1
Location: 16831..17184

Top 3 Functional Annotations

Value Algorithm Source
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 96.0
  • Bit_score: 112
  • Evalue 1.60e-22
30S ribosomal protein S28e similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 100.0
  • Bit_score: 100
  • Evalue 1.70e-19
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 116.0
  • Bit_score: 127
  • Evalue 6.60e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Ignavibacteria_37_17_curated → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 354
ATGGCAGAAAAGACCGATGCAAAACCCGCGGCAAAACCTGCCGGGAGCGCGAAGCCGGACGCAGCGAAAGCGCCTGCGGCTCCTGCGGGAAAACCGGGAGCAGCCGCGCCGCGTGGTTCGGAACCTGTCAGGTTCACGATGTCGTTCCCAGCCCGCGTGGAGGAGATCGTCGGCCGCACGGGTTCGCGTGGCGAGGCCATCCAGGTCCGTTGCCGCGTGCTCACGGGCCGCGACCAGGACAAGGTCCTGCGGCGCAACGTCAAGGGCCCCATCCAGAAGGATGACATCCTCATGTTGAGGGAGACTGAGATCGAAGCGCGGCCGCTCGGCAAGGGCGGACGCGGAAGCGTGTAG
PROTEIN sequence
Length: 118
MAEKTDAKPAAKPAGSAKPDAAKAPAAPAGKPGAAAPRGSEPVRFTMSFPARVEEIVGRTGSRGEAIQVRCRVLTGRDQDKVLRRNVKGPIQKDDILMLRETEIEARPLGKGGRGSV*