ggKbase home page

S_p2_S4_coassembly_k141_3244344_7

Organism: S_p2_S4_coassembly_NC10_61_204

near complete RP 49 / 55 BSCG 50 / 51 ASCG 11 / 38 MC: 1
Location: comp(7149..7694)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding protein family protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 180.0
  • Bit_score: 262
  • Evalue 2.50e-67
Cold-shock protein DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 186.0
  • Bit_score: 226
  • Evalue 3.30e-57
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 180.0
  • Bit_score: 262
  • Evalue 3.50e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 546
ATGCAGCTTCCACTGCAAGTGACACTACGCGACATCTCTCCTTCCGAGGCGATTGAGGTCTATATCCGAGAGAGGGCTGCCAAGCTGGAGCAGTTTTACGATAGGATCATGAGCTGCCGGGTCGTGGTGGAGGCCCCGGTTCGCCACCACCGCAAAGGGGGGCCTTACAAGGTGCGTATCGACCTGACCGTGCCCGGCGACGAGCTCGTGGTCGATCGCCAGGTGGACGAGGACCTCTATGTGGCGATCCGGGACGCCTTTCATGTCGCCCGACGCCGACTGGAGGATCATGCGCGCCGTCAGCGGGGCGCCGTAAAGGTCCACGAAGCCGCCCCCCGTGCTCATGTGGGCAAGCTGTTTCCAGACGAGGGGCATGGGTTCCTTGAGACGCCCGATGGCCGCGAGATCTATTTCCATCGCAACAGTGTTAAAGACTCGGGCTTCGACCGTCTCGAGATCGGGACGGAGGTGCGCTTCACCGAAGAACCCGGTGAGCAGGGCCCTCAGGCCAGCACGGTGACCATCGTGGGCAAACGTCACGTGTGA
PROTEIN sequence
Length: 182
MQLPLQVTLRDISPSEAIEVYIRERAAKLEQFYDRIMSCRVVVEAPVRHHRKGGPYKVRIDLTVPGDELVVDRQVDEDLYVAIRDAFHVARRRLEDHARRQRGAVKVHEAAPRAHVGKLFPDEGHGFLETPDGREIYFHRNSVKDSGFDRLEIGTEVRFTEEPGEQGPQASTVTIVGKRHV*