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S5_GD2017_2_S2_scaffold_4566_11

Organism: GD2017-2_S2_QB3_180125_Parcubacteria_47_8

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: 10795..11505

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilM bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 214.0
  • Bit_score: 203
  • Evalue 1.80e-49
pilM; type IV pilus assembly protein PilM similarity KEGG
DB: KEGG
  • Identity: 26.3
  • Coverage: 217.0
  • Bit_score: 71
  • Evalue 2.30e-10
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 225.0
  • Bit_score: 245
  • Evalue 5.70e-62

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Taxonomy

R_RIF_OD1_09_41_20 → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 711
GTGAGGATGGCGTTGCGCTCGATCTCGACGGCGGAAGAAGACGCCGCGGCAGCGAAAAATCAAAAGATCGAGGTGATGATCGTCGCTATTCATAACCAGATATTAAGCAAGTACCAGGATATTGTAACGAAAGTCGGTCTTGAAAAGAGCTCGTTTGAAATAGAGGTGTATAGTTCCATTCGCGCGACGCTTGGGCACGACATGGCGCCGATAATGTTTCTTGATATGGGAGCGGGTATCACAAAGCTTGCCATGGTAGAGCAGGGTATCATTAAGAGCGTACACATTGTGAGCCGCGGTTCTCAGGAGATTACGCTTGCGCTTTCGCGCGCGCTGAACATAAGCATTGCGAAAGCGGAAGGGCTGAAGAGAAATGTCGGACTTTTGGGGAAAGACGAGGATGGCCGCAAGGTTTCGTCGATCATTGAATCCACAGCCAGTTATATCTTTACGGAAGCAAATAGAGTATTATTAAGTTACCAGAATAAGAACAACAGATCCGTGAGTAAAGTGGTACTGACCGGAGGCGGGGCGCTCCTCAAAGGATTGCCGGAGTTCTCTCGCAAATGGCTTGAGGCGGATGTGATACTTGGCGACTCGTTTTCCAAAGTCGAATCACCGGCATTTCTGCAAGGAGTGCTTGCCGAAGCGGGTCCGGAATTTTCCGTTGCCATCGGACTTGCGCTGAAGAAACTGCAAGAGACATCATAA
PROTEIN sequence
Length: 237
VRMALRSISTAEEDAAAAKNQKIEVMIVAIHNQILSKYQDIVTKVGLEKSSFEIEVYSSIRATLGHDMAPIMFLDMGAGITKLAMVEQGIIKSVHIVSRGSQEITLALSRALNISIAKAEGLKRNVGLLGKDEDGRKVSSIIESTASYIFTEANRVLLSYQNKNNRSVSKVVLTGGGALLKGLPEFSRKWLEADVILGDSFSKVESPAFLQGVLAEAGPEFSVAIGLALKKLQETS*