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ACD13_27

Alias: ACD13_27842.84310.19

Search features with annotation key words

Displaying items 61-90 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_27_61
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(49999..50958)
DNA (960bp) protein (320aa)
tRNA synthetase
coiled-coil (db=Coil db_id=coil from=243 to=267 evalue=NA)
genX: lysyl-tRNA synthetase-like protein Gen (db=HMMTigr db_id=TIGR00462 from=17 to=311 evalue=2.4e-115 interpro_id=IPR004525 interpro_description=Lysyl-tRNA synthetase-related GO=Molecular Function: lysine-tRNA ligase activity (GO:0004824), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: lysyl-tRNA aminoacylation (GO:0006430))
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=10 to=312 evalue=3.9e-70)
ACD13_27_62
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

51021..51404
DNA (384bp) protein (128aa)
hypothetical protein
Protein methyltransferase, PBCV type (db=HMMPIR db_id=PIRSF022536 from=1 to=127 evalue=7.1e-23 interpro_id=IPR009207 interpro_description=Histone methyltransferase, PBCV type putative)
SET domain (db=superfamily db_id=SSF82199 from=1 to=115 evalue=7.2e-22)
SET (db=HMMPfam db_id=PF00856 from=14 to=111 evalue=1.9e-14 interpro_id=IPR001214 interpro_description=SET domain)
ACD13_27_63
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

51718..51954
DNA (237bp) protein (79aa)
seg (db=Seg db_id=seg from=49 to=78)
Uncharacterized protein {ECO:0000313|EMBL:KKR62910.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_64
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

52071..52385
DNA (315bp) protein (105aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=17 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
YGGT (db=HMMPfam db_id=PF02325 from=11 to=88 evalue=2.3e-08 interpro_id=IPR003425 interpro_description=Protein of unknown function YGGT GO=Cellular Component: membrane (GO:0016020))
ACD13_27_65
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(52400..52702)
DNA (303bp) protein (101aa)
transcriptional coactivator/pterin dehydratase
Pterin_4a (db=HMMPfam db_id=PF01329 from=7 to=97 evalue=9.7e-23 interpro_id=IPR001533 interpro_description=Transcriptional coactivator/pterin dehydratase GO=Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124))
PCD-like (db=superfamily db_id=SSF55248 from=6 to=97 evalue=1.1e-22 interpro_id=IPR001533 interpro_description=Transcriptional coactivator/pterin dehydratase GO=Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124))
no description (db=Gene3D db_id=G3DSA:3.30.1360.20 from=1 to=96 evalue=9.7e-19 interpro_id=IPR001533 interpro_description=Transcriptional coactivator/pterin dehydratase GO=Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (GO:0008124))
ACD13_27_66
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

52794..53012
DNA (219bp) protein (73aa)
DUF167 (db=HMMPfam db_id=PF02594 from=3 to=71 evalue=1.2e-15 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
YggU-like (db=superfamily db_id=SSF69786 from=3 to=72 evalue=8.2e-13 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
no description (db=Gene3D db_id=G3DSA:3.30.1200.10 from=3 to=71 evalue=1.1e-12 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
Uncharacterized protein {ECO:0000313|EMBL:KKR56938.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_27_67

Not on your lists

comp(53028..53243)
DNA (216bp) protein (72aa)
53028..53243 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE12957.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD13_27_68
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(53487..54218)
DNA (732bp) protein (244aa)
hypothetical protein
T5orf172 (db=HMMPfam db_id=PF10544 from=171 to=236 evalue=1.5e-10 interpro_id=IPR018306 interpro_description=Putative helicase A859L)
hypothetical protein alias=ACD13_C00027G00068,ACD13_27842.84310.19G0068,ACD13_27842.84310.19_68 id=6859 tax=ACD13 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR63328.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_69
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(54379..55422)
DNA (1044bp) protein (348aa)
coiled-coil (db=Coil db_id=coil from=152 to=173 evalue=NA)
seg (db=Seg db_id=seg from=70 to=85)
Uncharacterized protein {ECO:0000313|EMBL:KKR63327.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_70
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

55794..56966
DNA (1173bp) protein (391aa)
bioF; 8-amino-7-oxononanoate synthase
bioF; 8-amino-7-oxononanoate synthase
Pyridoxal phosphate-dependent acyltransferase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MG41_RHOM4 (db=UNIREF evalue=5.0e-142 bit_score=508.0 identity=64.08 coverage=98.4654731457801)
seg (db=Seg db_id=seg from=87 to=100)
ACD13_27_71
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

56963..57907
DNA (945bp) protein (315aa)
putative epimerase/dehydratase
putative epimerase/dehydratase
L-threonine 3-dehydrogenase n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XV62_9DEIN (db=UNIREF evalue=4.0e-92 bit_score=341.0 identity=52.08 coverage=98.0952380952381)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=6 to=312 evalue=9.0e-115)
ACD13_27_72

Not on your lists

comp(57915..58994)
DNA (1080bp) protein (360aa)
RpoD subfamily RNA polymerase sigma-70 subunit
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3K2_DESAS (db=UNIREF evalue=7.0e-114 bit_score=414.0 identity=63.35 coverage=96.1111111111111)
coiled-coil (db=Coil db_id=coil from=28 to=49 evalue=NA)
ACD13_27_73

Not on your lists

comp(59012..60814)
DNA (1803bp) protein (601aa)
hypothetical protein
hypothetical protein
DNA primase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKT6_MOOTA (db=UNIREF evalue=1.0e-86 bit_score=324.0 identity=40.62 coverage=77.5374376039933)
coiled-coil (db=Coil db_id=coil from=537 to=575 evalue=NA)
ACD13_27_74
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(61108..61617)
DNA (510bp) protein (170aa)
NUDIX hydrolase (db=KEGG evalue=4.0e-13 bit_score=77.0 identity=34.87 coverage=75.8823529411765)
NUDIX hydrolase n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3F2S9_CONWI (db=UNIREF evalue=4.0e-13 bit_score=77.0 identity=34.87 coverage=75.8823529411765)
Nudix (db=superfamily db_id=SSF55811 from=17 to=169 evalue=5.8e-17 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=13 to=169 evalue=6.0e-16 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD13_27_75
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(61584..62036)
DNA (453bp) protein (151aa)
Nudix (db=superfamily db_id=SSF55811 from=8 to=140 evalue=3.4e-11 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=14 to=132 evalue=5.3e-09 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=7 to=141 evalue=1.1e-08 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX hydrolase {ECO:0000313|EMBL:KKR56948.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_27_76
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(62218..62766)
DNA (549bp) protein (183aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=84)
Uncharacterized protein {ECO:0000313|EMBL:KKR56949.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_27_77
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(63030..63701)
DNA (672bp) protein (224aa)
comF family protein
PRTase-like (db=superfamily db_id=SSF53271 from=62 to=223 evalue=1.3e-18)
Pribosyltran (db=HMMPfam db_id=PF00156 from=154 to=216 evalue=7.6e-07 interpro_id=IPR000836 interpro_description=Phosphoribosyltransferase GO=Biological Process: nucleoside metabolic process (GO:0009116))
phosphoribosyltransferase alias=ACD13_C00027G00077,ACD13_27842.84310.19G0077,ACD13_27842.84310.19_77 id=6873 tax=ACD13 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
ACD13_27_78
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(64140..64574)
DNA (435bp) protein (145aa)
smpB; SsrA-binding protein
SsrA-binding protein n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=SSRP_SULSY (db=UNIREF evalue=1.0e-25 bit_score=118.0 identity=49.31 coverage=95.8620689655172)
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=1 to=141 evalue=1.9e-39 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=5 to=123 evalue=4.4e-31 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
ACD13_27_79
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(64608..66500)
DNA (1893bp) protein (631aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=273 to=292)
seg (db=Seg db_id=seg from=378 to=399)
seg (db=Seg db_id=seg from=275 to=293)
NHL repeat (db=superfamily db_id=SSF101898 from=375 to=610 evalue=2.2e-14)
ACD13_27_80
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(66502..66726)
DNA (225bp) protein (75aa)
seg (db=Seg db_id=seg from=60 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=73)
Uncharacterized protein {ECO:0000313|EMBL:KKR64000.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_81
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(66731..67375)
DNA (645bp) protein (215aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=110 to=132)
DUF304 (db=HMMPfam db_id=PF03703 from=127 to=203 evalue=0.00019 interpro_id=IPR005182 interpro_description=Protein of unknown function DUF304, transmembrane flanked domain, bacterial)
ACD13_27_82
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(67391..67903)
DNA (513bp) protein (171aa)
seg (db=Seg db_id=seg from=2 to=26)
seg (db=Seg db_id=seg from=112 to=121)
SpoIID/LytB domain protein {ECO:0000313|EMBL:KKR56364.1}; TaxID=1618588 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_40_30.;"
ACD13_27_83
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria

Not on your lists

69182..69760
DNA (579bp) protein (193aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=32 to=43)
ACD13_27_84
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

70130..70462
DNA (333bp) protein (111aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
seg (db=Seg db_id=seg from=41 to=63)
Uncharacterized protein {ECO:0000313|EMBL:KKR64005.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_85
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

70463..70816
DNA (354bp) protein (118aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
Uncharacterized protein {ECO:0000313|EMBL:KKR64006.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_86
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

70820..71197
DNA (378bp) protein (126aa)
seg (db=Seg db_id=seg from=58 to=69)
seg (db=Seg db_id=seg from=79 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
ACD13_27_87
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

71194..71583
DNA (390bp) protein (130aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
seg (db=Seg db_id=seg from=46 to=60)
Uncharacterized protein {ECO:0000313|EMBL:KKR64008.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_88
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

71598..71942
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=34 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=109)
Uncharacterized protein {ECO:0000313|EMBL:KKR64009.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
ACD13_27_89
GWC2_OP11_40_30, Woesebacteria, Microgenomates, Bacteria

Not on your lists

71997..72278
DNA (282bp) protein (94aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=56 to=82)
seg (db=Seg db_id=seg from=22 to=40)
ACD13_27_90
GWA1_OP11_40_43_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

72316..74778
DNA (2463bp) protein (821aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=26)
seg (db=Seg db_id=seg from=556 to=569)
seg (db=Seg db_id=seg from=14 to=26)
Uncharacterized protein {ECO:0000313|EMBL:KKR64011.1}; TaxID=1618553 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_40_43.;"
Displaying items 61-90 of 96 in total

View Taxonomy