ggKbase home page
Advanced Search
Search Help

ACD13_29_2 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG 		52.8 999.99 1139 0.0 adg:Adeg_1532
seg (db=Seg db_id=seg from=1076 to=1094) iprscan interpro
DB: Seg 		null null null null adg:Adeg_1532
seg (db=Seg db_id=seg from=611 to=621) iprscan interpro
DB: Seg 		null null null null adg:Adeg_1532
seg (db=Seg db_id=seg from=782 to=793) iprscan interpro
DB: Seg 		null null null null adg:Adeg_1532
RNA_POL_BETA (db=PatternScan db_id=PS01166 from=853 to=865 evalue=0.0 interpro_id=IPR007121 interpro_description=RNA polymerase, beta subunit, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: PatternScan 		null null null 0.0 adg:Adeg_1532
rpoB: DNA-directed RNA polymerase, beta subu (db=HMMTigr db_id=TIGR02013 from=4 to=1075 evalue=0.0 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMTigr 		null null null 0.0 adg:Adeg_1532
DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 (db=HMMPanther db_id=PTHR20856 from=365 to=1091 evalue=0.0 interpro_id=IPR015712 interpro_description=DNA-directed RNA polymerase, subunit 2 GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: ribonucleoside binding (GO:0032549)) iprscan interpro
DB: HMMPanther 		null null null 0.0 adg:Adeg_1532
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=6 to=1076 evalue=0.0) iprscan interpro
DB: superfamily 		null null null 0.0 adg:Adeg_1532
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR20856:SF3 from=365 to=1091 evalue=0.0) iprscan interpro
DB: HMMPanther 		null null null 0.0 adg:Adeg_1532
RNA_pol_Rpb2_6 (db=HMMPfam db_id=PF00562 from=571 to=1000 evalue=2.1e-138 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 2.10e-138 adg:Adeg_1532
no description (db=Gene3D db_id=G3DSA:3.90.1100.10 from=6 to=594 evalue=5.8e-96) iprscan interpro
DB: Gene3D 		null null null 5.80e-96 adg:Adeg_1532
no description (db=Gene3D db_id=G3DSA:2.40.270.10 from=682 to=986 evalue=2.5e-61) iprscan interpro
DB: Gene3D 		null null null 2.50e-61 adg:Adeg_1532
RNA_pol_Rpb2_2 (db=HMMPfam db_id=PF04561 from=135 to=328 evalue=2.1e-33 interpro_id=IPR007642 interpro_description=RNA polymerase Rpb2, domain 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 2.10e-33 adg:Adeg_1532
RNA_pol_Rpb2_7 (db=HMMPfam db_id=PF04560 from=1002 to=1074 evalue=3.9e-25 interpro_id=IPR007641 interpro_description=RNA polymerase Rpb2, domain 7 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 3.90e-25 adg:Adeg_1532
RNA_pol_Rpb2_3 (db=HMMPfam db_id=PF04565 from=390 to=457 evalue=3.8e-21 interpro_id=IPR007645 interpro_description=RNA polymerase Rpb2, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 3.80e-21 adg:Adeg_1532
RNA_pol_Rpb2_1 (db=HMMPfam db_id=PF04563 from=22 to=384 evalue=5.3e-20 interpro_id=IPR007644 interpro_description=RNA polymerase, beta subunit, protrusion GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 5.30e-20 adg:Adeg_1532
RNA_pol_Rpb2_45 (db=HMMPfam db_id=PF10385 from=467 to=535 evalue=7.4e-18 interpro_id=IPR019462 interpro_description=DNA-directed RNA polymerase, beta subunit, external 1 domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam 		null null null 7.40e-18 adg:Adeg_1532
no description (db=Gene3D db_id=G3DSA:2.40.50.100 from=595 to=676 evalue=1.2e-11) iprscan interpro
DB: Gene3D 		null null null 1.20e-11 adg:Adeg_1532
RNApol_bact_RpoB (db=HAMAP db_id=MF_01321 from=9 to=1078 evalue=11.151 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HAMAP 		null null null 1.12e+01 adg:Adeg_1532
DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] alias=ACD13_11237.143636.20G0002,ACD13_11237.143636.20_2,ACD13_C00029G00002 id=7059 tax=ACD13 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11 similarity UNIREF
DB: UNIREF90 		100.0 null 2194 0.0 adg:Adeg_1532
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su UNIPROT
DB: UniProtKB 		100.0 999.99 2194 0.0 K2E5I0_9BACT