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ACD13_41_9

Organism: ACD13

megabin RP 51 / 55 MC: 44 BSCG 48 / 51 MC: 37 ASCG 0 / 38
Location: 7971..8579

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 177.0
  • Bit_score: 126
  • Evalue 6.70e-27
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=23 to=181 evalue=1.2e-39 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-39
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=115 evalue=2.4e-23 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-23

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 609
ATGCAAAAAGATATTGATAAATATTCAGACGAAAAAATAATCAAGCTTGCTTTAAAGGAAAATAAAGAGCTTTTCTCTGTTGTTATTGAAAGATACCGGCAAAAACTCGTTAATTACTCTTATTACATAACCAACGATTGGGAGAGTGCGGAGGATATAGTTACCGATGTTTTTATTAAAGTAGGAAAGAATTTGGAAAAATTTGATTTAAATAAAAAATTTTCAACCTGGATATATAAAATTGTCCACAACCAGACAATCTCTCATTTGAGAAAAAAGAAAAAGGAAGTTTCGTTAACCAAAAATGAATGGCTGGATAAAATCCCGAGTGAGGGAGATGTAGAAGACGATCTTAATAAAAAACAAACAAAAGAACTTTTGCACGGCTGTCTGAAAAGTCTGCCTGAAGTTTACCGGCCGCCCTTGGCTCTTAGCTATTTGGAAAATAAATCTTATAAAGAAATTTCAAAGGTTCTTGGCATTTCCGAAGGAACTGTGGCATCAAGAATAAACAGGGGAAAGAGGATGATGAAGGGGCTTTGTCTCCACGATCCTTCGATAAAAAAGGCTTACGACACCATCAAAGGAAAATCCGACCAAAAAGATTAG
PROTEIN sequence
Length: 203
MQKDIDKYSDEKIIKLALKENKELFSVVIERYRQKLVNYSYYITNDWESAEDIVTDVFIKVGKNLEKFDLNKKFSTWIYKIVHNQTISHLRKKKKEVSLTKNEWLDKIPSEGDVEDDLNKKQTKELLHGCLKSLPEVYRPPLALSYLENKSYKEISKVLGISEGTVASRINRGKRMMKGLCLHDPSIKKAYDTIKGKSDQKD*