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cn_combo_scaffold_581_28

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(30408..30731)

Top 3 Functional Annotations

Value Algorithm Source
nucleoid DNA-binding protein; K05788 integration host factor subunit beta id=12555991 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 210
  • Evalue 6.70e-52
nucleoid DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 98.0
  • Bit_score: 166
  • Evalue 2.60e-38
nucleoid DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 91.0
  • Bit_score: 137
  • Evalue 2.00e-30

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGACCAAAGCCGAACTCGTCGAAGAAGTGGCCCAGGTGGCGACCCTGACCAAGAAACATGCGGAGGTCATCGTCGACACGGTGTTCCAGAGCATCGTCGAGGCCCTGCAGCGGGGCGAGAAGATCGAACTGCGCGGGTTCGGCAGCTTCCGCCTGCGTCGCCGCGAGTCGCGCAAGGGGCGCAATCCGAAGACCGGCGATCGGGTGGACGTGCCCCCGAAGCAGGTGCCCTACTTCAAGCCGGGCAAGGAACTGAAAGATCTCATCAACAAGGCGGATGCGGAGGCCGAGGCCCTCGATCAGGCAGGCGCCCGGCCTGTCTAG
PROTEIN sequence
Length: 108
MTKAELVEEVAQVATLTKKHAEVIVDTVFQSIVEALQRGEKIELRGFGSFRLRRRESRKGRNPKTGDRVDVPPKQVPYFKPGKELKDLINKADAEAEALDQAGARPV*