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cn_combo_scaffold_1049_10

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(12220..12957)

Top 3 Functional Annotations

Value Algorithm Source
short chain dehydrogenase id=12556251 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 484
  • Evalue 7.10e-134
Short chain dehydrogenase {ECO:0000313|EMBL:EDM79030.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Ples similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 245.0
  • Bit_score: 326
  • Evalue 4.50e-86
short chain dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 246.0
  • Bit_score: 181
  • Evalue 3.60e-43

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Taxonomy

Plesiocystis pacifica → Plesiocystis → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
GTGACCGTCGTGATTCTGGGAGGGACGAAGGGCATCGGCCGGGCGGTGGCGCGTCGCTGTGCCGCGCGGGGGGACCGTGTGTTCCTGCTCGGACGCGACGCGGCCGATCTGGCCAGGAGCGCGGCCGATCTCGACGTCCGCGCGGGCCGCGCCGTGGCGGCCGGGACGGCCGTCTGCGACCTGGCCGATCCCGACACCTTCGCCCCCGCGCTGGCCGCGGCGGCCGAGGCGCTGGGCACCATCGACACGGTCGTCGTGACGGCGGCGGACTTCGCGACGCAGGACGTGCTCGAGCGCGATCTCGACCGCACGCGCCGCCTGCTGACGCTCAATTTCGCGCACACCGTCGTCTTCTGCGAGCACGCGCGACCGTATCTGCTGCCGCGCGGCGGCACGCTGTGCGTGGTCAGTTCCGTGGCCGGGGATCGCGGGCGCACACCGGTCATTCTGTACGGCGCCAGCAAGGCCGGCCTCTCGCAGTACCTGGAAGGGCTCGACCACAAGTATCGCGGCGCGGGTCTCCGGGTGGTGTGCGTGAAGCCGGGATTCGTGAAGACGGGCATGACGGCCGGCCTGCGTCCGCCGCCCTTCGCCGGCGAGCCCGATCAGGTCGCCCGCGACATCGTCCGGGCGATCGATCGCGGCACGCCCGTGGTGTATACGCCCGCGATCTGGGCACTCGTGATGTTCGTGATCCGCCGGCTGCCGAGGGCGGTCATGCGGCGGATAGGATTCTGA
PROTEIN sequence
Length: 246
VTVVILGGTKGIGRAVARRCAARGDRVFLLGRDAADLARSAADLDVRAGRAVAAGTAVCDLADPDTFAPALAAAAEALGTIDTVVVTAADFATQDVLERDLDRTRRLLTLNFAHTVVFCEHARPYLLPRGGTLCVVSSVAGDRGRTPVILYGASKAGLSQYLEGLDHKYRGAGLRVVCVKPGFVKTGMTAGLRPPPFAGEPDQVARDIVRAIDRGTPVVYTPAIWALVMFVIRRLPRAVMRRIGF*