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cn_combo_scaffold_1382_6

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 3638..4207

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12557811 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 375
  • Evalue 3.60e-101
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 189.0
  • Bit_score: 176
  • Evalue 2.60e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 184.0
  • Bit_score: 166
  • Evalue 5.50e-39

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGCAGCCCGACGACGCGGCAGCCATGGCCAGGGCCATGGCCGGAGAAGATGACGGCTTCCGCGAACTCGTGGACCGGCACGGCCGGGCCCTCTATCAACTGGCCTACCGCATCACCGGACGGGCCGAGGATGCCGAAGACGTGGTCCAGGAGACCTTCATCAAGGCATTCCGGCAACTGGACCGGTTCGAAGCCCGCTCGAGCGTGGGGACCTGGCTGCACCGGATTGGCGCCAACTGCGCCATCGACCTGGTCCGTCGCCGACGACCGTTCGAGGTGATGGAAGCGCCCGATCGGCTCGATCAGCGGGCGGCAGGCGGGGCCTGGCCCTCGCAGACCGCCGTGGTGGCGTCGGCCCAGATCCAGCAGCGGATCGACGACACGATGGCCGAGCTGTCCGCGCGCGAACGGGCCGCCTTCGTGATGCGCCATTTTCACGATTGCTCGATCAACGACATCGCCACCGCGCTCGACATGAACACCAGCGCGGCCAAACACGCCGTGTTCCGGGCCGTGCGCAAGATGCGCGCAGCACTGCGGATCTTCGTGGACGGACAGACAGATGACTGA
PROTEIN sequence
Length: 190
MQPDDAAAMARAMAGEDDGFRELVDRHGRALYQLAYRITGRAEDAEDVVQETFIKAFRQLDRFEARSSVGTWLHRIGANCAIDLVRRRRPFEVMEAPDRLDQRAAGGAWPSQTAVVASAQIQQRIDDTMAELSARERAAFVMRHFHDCSINDIATALDMNTSAAKHAVFRAVRKMRAALRIFVDGQTDD*