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cn_combo_scaffold_1491_22

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 26148..26741

Top 3 Functional Annotations

Value Algorithm Source
mdtA1; RND family efflux transporter; K02005 HlyD family secretion protein id=12557574 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 172.0
  • Bit_score: 337
  • Evalue 8.70e-90
mdtA1; RND family efflux transporter similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 193.0
  • Bit_score: 206
  • Evalue 8.50e-51
RND family efflux transporter {ECO:0000313|EMBL:CAN91267.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorang similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 193.0
  • Bit_score: 206
  • Evalue 4.20e-50

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
GTGCGCCTGGCGCACACGCGCGTCACGGCGCCCGAGGCCGGCACCATCCTCACGCGCGCCGTCGAGCCCGGGGACACGGTGCAGCCGGGTGCCACGCTGTTCGAGCTGGCCGCAGGTGACCACACCGAGCTCGTGATCGAGCCGGACGAACGCAACCTGGCGTGGATCCGCGAAGGCCAGGTCGCGCGGGCGTCGGCCGACGCCTTTCCCGATCGCCAGTTCGACGCACGCGTGGACTTCGTCGCCCCGGCCGTCGACGCCAGGCGCGGCAGCATCGAGGTGCGGCTCGTCGTGCCGGATCCGCCCCCGGGCCTGCGGCCGGACATGACCGTGTCCGTGGAACTCGCCGTGGCCACGGAGCACGACGTGGTGGTCGTCCCGAGCGAGGCGCTGCGCGACGTGACGTCCGGCACGCCATTCGTCTGGGTCGTCGAGGGTGCGCGCGTCGCACGCCGCCCCGTCATGCTCGGCCTGCGCGGCGACGGTCACAGCGAAATCGTGTCGGGCCTCGACGCCGGCGCCGAGGTCGTCCTCGCTACCGATCGGCCGATCTCCGATGGCCAGCGCGTGCGGACACGCCCCGAGGTGCGGTGA
PROTEIN sequence
Length: 198
VRLAHTRVTAPEAGTILTRAVEPGDTVQPGATLFELAAGDHTELVIEPDERNLAWIREGQVARASADAFPDRQFDARVDFVAPAVDARRGSIEVRLVVPDPPPGLRPDMTVSVELAVATEHDVVVVPSEALRDVTSGTPFVWVVEGARVARRPVMLGLRGDGHSEIVSGLDAGAEVVLATDRPISDGQRVRTRPEVR*