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cn_combo_scaffold_1491_23

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 26741..27961

Top 3 Functional Annotations

Value Algorithm Source
lolC; lipoprotein releasing system transmembrane protein lolC; K09808 lipoprotein-releasing system permease protein id=12557575 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 407.0
  • Bit_score: 769
  • Evalue 2.40e-219
lolC; lipoprotein releasing system transmembrane protein lolC similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 409.0
  • Bit_score: 492
  • Evalue 9.40e-137
  • rbh
Lipoprotein releasing system transmembrane protein lolC {ECO:0000313|EMBL:CAN91268.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; S similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 409.0
  • Bit_score: 492
  • Evalue 4.70e-136

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGTCGTTCGCGTGGTTCGTCGCCCTGCGGTACCTGCGCGATGCCCGCGGCCAGACGACGCTCATCCTGGCGGCGGTGACCGTCGGCGTCAGCGTCATCGTGTTCCTGTCGGCGTTGATCAACGGCCTGCAGGCCTCTCTCATCGCCGCCACGCTCGGGTCGCAGCCGCACGTCACGCTGCGTCCGCCGCGCGAGGCGCCGCGGCCGGTCGTCGCGGCCACGCCCGGTCACGTCATCGCCCGAAGTGTGCAGCCGGCCTCGCAACGGCTGCGATCGATCGACCAGTGGCCGCGCGTGATGGACGACGCCGCCCGCGATCCGTCCGTGACCGCCGTCAGTCCCGTCGTCACCGGATCGGGCGTGGTGACGCGCCTCGACGCGCACGTACCTGTCGTCGTCCGCGGCGTGGAGCCCGATCGATTCATCGCGATCATCGACCTGCCGTCGCGCATGATCGAGGGGCAATTCGCGATCGGTGCCGGACGAGTCGTCATCGGCCGCGATCTGGCCGAGGATCTCGGGGCAGCTGTCGGCGACCGCCTCCGGATCACGTCGACGGAAGACGTCACCGACATCGTGACGATTGCCGGGGTGTTCGCGCTCGGCAACGAGGGCGTCGACGGCAGCTGGATCGTCACGTCGCTGCCGCACGCGCAGGCGCTCTTCGCCTTGCCGGGCGGCGTGACCGCCATCGAGATGAAGGTGACGGACGTCTTCGACGCCGCCGGCGTCGCCGACGATCTCGCGCGGCGCACGGGGCTGACGGCCGACAGCTGGATGACCGTCAACGCCTCGCTGCTGTCGGGTCTGGCGGCACAGGCCAGCTCGAAGACGATGATTCAGAGTTTCGTCGTGCTGACGGTGGCGCTCGGCATCGCGAGCGTGCTGATCGTGTCGGTGGTGCAGAAGTCGCGCGAGATCGGCATCCTGCGCGCGGTGGGCACGCCCGCCCACCACATCCTGCTCGTCTTCCTGATTCAGGGCGGCGTGCTCGGGCTGACCGGATCGATCATCGGATCGGGCCTCGGCATGGCGTTCGCCAAGGCGTTCGAGACCGTGGCCGTCAACCCGGACGGCACGCCGCGGTTCCTCGTCCAGGTCAACGCCCTGCTGCTCGTCCAGTCGACGCTGCTCGCCACGGGCGTCGGGCTGCTCTCGGCCATCATCCCGGCCCGTCGCGCCTCGCGGCTCGATCCGGCCACGGCGATTCGTGGCGGCTGA
PROTEIN sequence
Length: 407
MSFAWFVALRYLRDARGQTTLILAAVTVGVSVIVFLSALINGLQASLIAATLGSQPHVTLRPPREAPRPVVAATPGHVIARSVQPASQRLRSIDQWPRVMDDAARDPSVTAVSPVVTGSGVVTRLDAHVPVVVRGVEPDRFIAIIDLPSRMIEGQFAIGAGRVVIGRDLAEDLGAAVGDRLRITSTEDVTDIVTIAGVFALGNEGVDGSWIVTSLPHAQALFALPGGVTAIEMKVTDVFDAAGVADDLARRTGLTADSWMTVNASLLSGLAAQASSKTMIQSFVVLTVALGIASVLIVSVVQKSREIGILRAVGTPAHHILLVFLIQGGVLGLTGSIIGSGLGMAFAKAFETVAVNPDGTPRFLVQVNALLLVQSTLLATGVGLLSAIIPARRASRLDPATAIRGG*