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cn_combo_scaffold_953_33

Organism: CN-SCN_Acidobacteria_32xOld

near complete RP 52 / 55 MC: 3 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(38989..39663)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB49_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 222.0
  • Bit_score: 279
  • Evalue 4.20e-72
OmpR family two-component response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 223.0
  • Bit_score: 299
  • Evalue 5.40e-78
OmpR family two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 222.0
  • Bit_score: 261
  • Evalue 1.90e-67

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGCGGGTCCTGGTGGTGGAAGACGATCGCAGCATCGCGGAGTTCGTGGCCGCGGGCCTGCGGCAGGAAGGCTACGCGGTCGACGTGGCCGGAACCGGCGTCGACGGGCTGGACCGCGTGCAGGCCACCAGCTACGACGCGGCGGTCGTCGACGTGATGCTGCCGCGGCTCGACGGCGTCAGCCTCGTCTCGGCCATGCGTCGCGCAGGCATCCGCACGCCGGTGCTGTTCCTCAGCGCGCGCCACGCCGTCGACGATCGCGTCCGCGGGCTGCAGGCCGGCGGCGACGATTACCTGACCAAGCCGTTCGCGTTCGTCGAACTGCTGGCCCGGCTGCAGGCGATCACGCGCCGGGCGCTGCCGGGTTCCGAGCCGCACGAACTGAGCGTGGCCGATCTCCGGATCGATCGCCTCACCCGGCACGTGGAACGACAGGGCCGGCCGATCGATCTCCGCCCGCGCGAGTACGCGCTGCTCGAATACCTCATGCAGCACGTCGGCCGCGTGGTGTCGAAGGCGATGATCGTGTCCCACGTCTGGGACTACAGCTTCGACTCGGGCACCAACGCGGTCGACGTGCTGGTGCACCGGCTGCGCGAGAAGATCGATCGCGACTTCTCCCCGAAGCTGCTCCACACGGTGCGGGGCGTCGGCTATGTCCTCAAGGTGGGGTAG
PROTEIN sequence
Length: 225
VRVLVVEDDRSIAEFVAAGLRQEGYAVDVAGTGVDGLDRVQATSYDAAVVDVMLPRLDGVSLVSAMRRAGIRTPVLFLSARHAVDDRVRGLQAGGDDYLTKPFAFVELLARLQAITRRALPGSEPHELSVADLRIDRLTRHVERQGRPIDLRPREYALLEYLMQHVGRVVSKAMIVSHVWDYSFDSGTNAVDVLVHRLREKIDRDFSPKLLHTVRGVGYVLKVG*