ggKbase home page

Meg22_46_Bin_225_scaffold_186_29

Organism: Meg22_46_Bin_225

partial RP 34 / 55 MC: 2 BSCG 19 / 51 ASCG 30 / 38 MC: 1
Location: comp(51313..52470)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 406.0
  • Bit_score: 206
  • Evalue 6.30e-50
Probable tRNA pseudouridine synthase D n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYB4_METFV similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 406.0
  • Bit_score: 206
  • Evalue 4.50e-50
tRNA pseudouridine synthase d trud similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 406.0
  • Bit_score: 206
  • Evalue 1.30e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanothermus fervidus → Methanothermus → Methanobacteriales → Methanobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1158
ATGAAAATAAAACAATCTCCTGAAGACTTCCTCGTAGAAGAACTCCCCCTTAGAAAGCCATCTGGGAAAGGGGATTACACGTGGTTTTGGCTAGAAAAAACAAACTATACAACAACTAGAGCCCTCATGCAGATTGCTAGAAATCTAAGAGTCTCGAGAACAAGATTTGGATTTTCTGGGAACAAAGATAAATATGCTCAGACAAAACAGGTGATTTCTGCTTGGAAAATAGAGCCACAACAGTTGGAGCGAATCGAGCTTAAGGATATAAATATCAAAATTATTGGCAAGGACGAAGAGCGAATTTGCTTAGGATACCACAAAGGCAATAAATTCGATATCGTAGTAAGGGGTCTTACGAAGCGCGAAGTTGATCTTGCAAAAGAAAGAGTAAAACTCAAGGATTGCATTCCTGATTATTTCGGTCCCCAAAGATTTAGCACGTCGCAGAATACACATCTAATCGGTAAGCACCTCTTGAAAGGCGAGCTAGAAGGCGCTGCAAAGGAGTTTCTTACTGGAACAGCAGATAACGAATTATCAAAGAAATATTCAAACTTTGCTAAAAAGAACTGGGGCTCATGGAAAGAAATTATTAAGCACTGCCCGGACTTCCTTGGTTTAGAGAAATCAGTTTTAAATTGGCTAATCAGAAACCCAACTGACTTTGCCGGAGCATTGCGAACAACGCCCAAACCTATCCGCCGTTTATTTATTCATGCTTATCAGTCTTGGATATTTAATATCGCTCTTTCCAAATATCTCGAGAGCAAAACAAAATGCGATAAGATAAAATTCCTAAACACAAAGCTAGCTTTCCCGAGGCAGAAAGTAGATACTTCCGACTCGAAATTCATAATTCCCGGAACTAAAATGCGAATACGAAAGGATATTTTCTCTCAGAACTTAAGCGAGCTGCTCAAAAAGGATAAGCTATCCTCCGATGATTTCCGAGTAAAACGAATGCCGAAGCTAGCTTCCGAAGGCGCTATAAGAGAGCCGTTCATCAAAATCAGTAAACTGCAGCTAGAGCTTCTGGACAAAAGCAATGTAACAAAAAACGAGAAACTTGATTTTTCCATAAAACTTAAATTCGATCTTGGCAAGGGTAGTTATGCAACTGTTGTATTAATGGCGTTATTCAAAAATGAGATTTGA
PROTEIN sequence
Length: 386
MKIKQSPEDFLVEELPLRKPSGKGDYTWFWLEKTNYTTTRALMQIARNLRVSRTRFGFSGNKDKYAQTKQVISAWKIEPQQLERIELKDINIKIIGKDEERICLGYHKGNKFDIVVRGLTKREVDLAKERVKLKDCIPDYFGPQRFSTSQNTHLIGKHLLKGELEGAAKEFLTGTADNELSKKYSNFAKKNWGSWKEIIKHCPDFLGLEKSVLNWLIRNPTDFAGALRTTPKPIRRLFIHAYQSWIFNIALSKYLESKTKCDKIKFLNTKLAFPRQKVDTSDSKFIIPGTKMRIRKDIFSQNLSELLKKDKLSSDDFRVKRMPKLASEGAIREPFIKISKLQLELLDKSNVTKNEKLDFSIKLKFDLGKGSYATVVLMALFKNEI*