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LacUAPBReffluent_at_i_20773_8

Organism: BSR_Lac_UAPBR_effluent_at_1_GWC2_Bacteroidetes_46_850_curated_52_9

near complete RP 38 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(13238..13486)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G401_ECHVK similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 82.0
  • Bit_score: 122
  • Evalue 1.80e-25
SusC/RagA family TonB-linked outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 82.0
  • Bit_score: 122
  • Evalue 5.10e-26
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AGA79741.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 82.0
  • Bit_score: 122
  • Evalue 2.50e-25

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Taxonomy

Echinicola vietnamensis → Echinicola → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 249
GTTTTCTCGGATTACTGGCTTGAGGATGCCTCCTACCTGCGACTGAAAAATATCCAACTGGGTTATACGCTCTCCAAACAGCTCACCGACAAAATCAATGCGGAACGCCTGAAGATCTATCTGTCGGTGGATAACCTGCTTACCCTGACCCACTATTTCGGCGGATTCGACCCTGAGGTACGAGAATCTGCAGGTGACTCTTACCCGCAGTTAAAGACCTTTGCCCTGGGTGTTCAAATGGGATTTTAA
PROTEIN sequence
Length: 83
VFSDYWLEDASYLRLKNIQLGYTLSKQLTDKINAERLKIYLSVDNLLTLTHYFGGFDPEVRESAGDSYPQLKTFALGVQMGF*