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LacUAPBReffluent_at_i_75839_21

Organism: BSR_Lac_UAPBR_effluent_at_1_GWC2_Bacteroidetes_46_850_curated_52_9

near complete RP 38 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(23852..24418)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=14 Tax=Bacteroides RepID=Q64WQ3_BACFR similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 3.60e-53
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 1.00e-53
RNA polymerase sigma-70 factor, expansion 1 family protein {ECO:0000313|EMBL:EYE46475.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 188.0
  • Bit_score: 215
  • Evalue 3.90e-53

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Taxonomy

Bacteroides fragilis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGAACCTCCTGAATAACAACGAAGAAACGATCATTTTGCTCCAAAAGGATAACGGATCCTTTTTTGAAGTAGTATACAAATATTACTTTCCGGGGTTATATTCATTTGCTACCCAATATGTGGAAAATGAAGAGGCGAAAGAGGTGGTTCAGGACACAATGCTGTGGCTTTGGGAAAACAGGCATACACTCATTCCGGAATTGTCTCTCAAGTCATTGCTCTTTACGATTGTAAAAAATAAATGTTTGAATTCCTGTAACCGGGGCCAACTCAGGAACAGAATGCTCGAAACGATGAAAGAAAAGCACCGTGAACGTTTTGAGGATCCCGACTTTTACCTGGAAAACGAACTATTCTCTCTCTTCAAACAAGCTTTGGAACAGTTACCCGAAAATTTTCGGGAAGTATTTGAAATGAGCCGGATGGAGGGACTCACCCATCATGAAATTGCGAAAAGGCTGGGGGTGTCGCCCCAAACCGTTAATTACAGGTTGGGGAAAGCGTTGGACATCCTGCGAACGGAGTTGAAAGATTACCTGCCGATTCTTCTGGTGATGTTACTGTAA
PROTEIN sequence
Length: 189
MNLLNNNEETIILLQKDNGSFFEVVYKYYFPGLYSFATQYVENEEAKEVVQDTMLWLWENRHTLIPELSLKSLLFTIVKNKCLNSCNRGQLRNRMLETMKEKHRERFEDPDFYLENELFSLFKQALEQLPENFREVFEMSRMEGLTHHEIAKRLGVSPQTVNYRLGKALDILRTELKDYLPILLVMLL*