ggKbase home page

BSR_Lac_UAPBR_middle_p_1_65184_2

Organism: BSR_Lac_UAPBR_middle_p_1_Thermotogae_38_9

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(178..2517)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase Rpb2 domain 6 n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JV79_9THEM similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 682.0
  • Bit_score: 337
  • Evalue 3.40e-89
RNA polymerase Rpb2 domain 6 {ECO:0000313|EMBL:CCU84794.1}; TaxID=1236046 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga infera.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 682.0
  • Bit_score: 337
  • Evalue 4.80e-89
DNA-directed RNA polymerase subunit beta/140 kD subunit similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 668.0
  • Bit_score: 323
  • Evalue 8.50e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesotoga infera → Mesotoga → Kosmotogales → Thermotogae → Thermotogae → Bacteria

Sequences

DNA sequence
Length: 2340
AAGTCACGCGACGGCGGACAAAAGATAGGAGAAATGGAGTTCTGGGCTCTTTTAAGTTATGGGAATATGGAGATTGTCAGACTTTTTAAGGAGCTTAACATTTCAAAAGAACGCGATATTAAAGCTGAAGATCTATATTTGGAAATTTTAAAGCGAGCAGGGTTAAATATTCAGACTGATGGCTTTAAAACTAAGATCTGCGGCGAGTATGCTCCTAATAAAAAGTACAGCAGGGTTATTTCAGAAATATTTAAAGGTCACATCAGCAACAGTTGGGCGCTGAAGTACATATACAATGAACAGAATCAAGAGAAGGAAGAGTTTGTCGGTGCTTTAAATTCGTTTAAATCAAACCACTCAAAAATAATCAAGAGTAAACTTAAGGAGTTGGATGAGAAAGTTTTTAACGAGCTAAAAAAGATTCTGGAAAAATATGAAACTGTTTTGAGGGTTGTAGTCAGAGATAAGAATCAAATCGTCAACAATTTAGATACTGATGATTTCTGTGTGACTTTTGAGAAGCGTGCTGATTCACTTATAAAAGATGTAATAGAAAAACTGGAACAAACAAGTGGGTTGAGAAAACAGTTTAAAAATCTTTCTTTTCAGAAGTCAGGATATGCGCGTTCTTATGTTGTGGCGAGAAGGATTCACAACTCAGGCAGAGCCGTAATAACCCCTCAACCCAGAACAGAGTATGGAATAACAGAGCTTACAGTTGATAATGTTCTGCTTCCCATCGAATTTGGTCTTGAGATGATAAAAACTTTGGAGGTTGAAGAAAAAGAACAGATACCGCAGGAATTGAGTAAAAATGCTCTGAAAGGAAGTAAAGAAGATAGGAAAAAGGTATCTGAAAAGTTGAATGAGCTTTTTACTCAAATATGGCCTGACAGACTGGTAATTTTAAACAGGCAGCCTTCGCTTGTCAGACACTCTATGCAGTCTTTCTATCCTAAGTTCTGGGAAAATTATACAATAGGATTGCCTATATTTGTGTGTCAGGGTTTTAATGCGGACTTTGACGGTGATACCATGGCTGTTTACTTTCCTGCAATGTGGAATGGAAAAATCAAAGAGGAAGCCGAAAAAATGCTACCTTCAAATAATCCTTTTTCTATAAGCAATTCTGATCTTAATTACTCTATAGATCAAGATATAGTTTATGGAAGGTATCTTATGCATGGAAAAAACAAAAAAGAAGTAAAAGCTGAAGTTAAAAAGGAAGTTCTTGGTAAGAGTTCCCAAGAGATAAGGAAGTACCTTAATGAGCTTATGAAAGATGCGCTTAAAGAGTCAACCGAGAAAAGTATGACCTTGGGAATCTATGAGATACAGAATCATAAGGATAAAGACAGCAGCATGTCAAAGATAGAGTCTTCACAGTGCAGAGGTAAAGAGAGTCAGTACGGTCAGATGTACAATAAGATAGATTCTAAGGATGAAAACTTTTTGCATGGTATTATCGCACAAAGCTACTATAATGTTGAAAATGGTGTTGCTGCCAGAGCCAGAAGAACTCTTATGGATAAAAAACTTCATGTAGCTGATGCAGGCTACTTTACGCGAAAACTTACGGAGTTTCTTGGTAGTATATATGTTGACAGTAGTTTTGAAGAGTATATTGAAGTTGATTTGAAATCCATATCAAATATAAAATCTTACGGATATTATGAAAACTTTATTATGAACAGATACGTTAAAATAAACGGAAAAGAAGTGTTTGTATGTGCTGAAAACTTTGAAGAGGTAAAGAAAAACAAAGATAATATGAAGCTTCTTTCTCCTGGGATAAGGAAAGAAGATGACGGCACATTCAGAGTATCCGGAAAGTATCTCGGAAAAGATATTTCAACACTAAAACCTTTTACAGATGGTCAAATGATCGGTCTTACGGCGGGACATGTTTTGGGTGAAAGAGGCACACAGCTTTCAATGGAGACTTTTCATTCTGGTTCTTCTGCATTAAACATGAATTCAGTGAGTTCATATATTTTTAAGTGTGCTTTTGAGGCAACAGATTATATTGATTTTTTAACCAGTATTCAGAATTATGACTCAGGCAGGGTTGACATTTTAGGTAAAATCAATCCGTACTCTGTATACTTTGAGATACTCTATAACTTCGCCGGATTTATTAAAAGTAATCTAAAAATTAAATCGTTCAAGAAGTTTATTTCAGATACAAAACTGAGAGGCTTTTTAACATGTCTTACTTTTGAAAGTTCTGATGCTATTATGAAAAAAGTTATGGAAGAACAACAGGACGGTAAAGGAATGATTTTTAATGAAACACATCCAAGAGTTAATTATTCGTTTTTCAGGAGGGATGGCGAATGA
PROTEIN sequence
Length: 780
KSRDGGQKIGEMEFWALLSYGNMEIVRLFKELNISKERDIKAEDLYLEILKRAGLNIQTDGFKTKICGEYAPNKKYSRVISEIFKGHISNSWALKYIYNEQNQEKEEFVGALNSFKSNHSKIIKSKLKELDEKVFNELKKILEKYETVLRVVVRDKNQIVNNLDTDDFCVTFEKRADSLIKDVIEKLEQTSGLRKQFKNLSFQKSGYARSYVVARRIHNSGRAVITPQPRTEYGITELTVDNVLLPIEFGLEMIKTLEVEEKEQIPQELSKNALKGSKEDRKKVSEKLNELFTQIWPDRLVILNRQPSLVRHSMQSFYPKFWENYTIGLPIFVCQGFNADFDGDTMAVYFPAMWNGKIKEEAEKMLPSNNPFSISNSDLNYSIDQDIVYGRYLMHGKNKKEVKAEVKKEVLGKSSQEIRKYLNELMKDALKESTEKSMTLGIYEIQNHKDKDSSMSKIESSQCRGKESQYGQMYNKIDSKDENFLHGIIAQSYYNVENGVAARARRTLMDKKLHVADAGYFTRKLTEFLGSIYVDSSFEEYIEVDLKSISNIKSYGYYENFIMNRYVKINGKEVFVCAENFEEVKKNKDNMKLLSPGIRKEDDGTFRVSGKYLGKDISTLKPFTDGQMIGLTAGHVLGERGTQLSMETFHSGSSALNMNSVSSYIFKCAFEATDYIDFLTSIQNYDSGRVDILGKINPYSVYFEILYNFAGFIKSNLKIKSFKKFISDTKLRGFLTCLTFESSDAIMKKVMEEQQDGKGMIFNETHPRVNYSFFRRDGE*