ggKbase home page

cn_combo_scaffold_1_28

Organism: CN-SCN_Leifsonia_139xOld

near complete RP 52 / 55 MC: 2 BSCG 48 / 51 ASCG 13 / 38
Location: 35874..36968

Top 3 Functional Annotations

Value Algorithm Source
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=7721650 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 365.0
  • Bit_score: 731
  • Evalue 3.80e-208
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 368.0
  • Bit_score: 628
  • Evalue 6.40e-177
tRNA-specific 2-thiouridylase MnmA similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 358.0
  • Bit_score: 612
  • Evalue 9.50e-173

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frigoribacterium sp. MEB024 → Frigoribacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1095
ATGAGCGGGGGAGTCGACTCCGCCGTCGCCGCCGCGCGCGCCGTCGACGCCGGCCACGACGTCGTCGGGGTGCACCTCGCGCTCAGCCGCATGCCGGGCACCCTCCGCACGGGCTCGCGCGGCTGCTGCACGATCGAGGACTCGATGGACGCCCAGCGCGCCGCGAACCTCATCGGCATCCCGTACTACGTGTGGGACTTCTCCGCGCGCTTCAAGGAGGACGTCGTCGACGACTTCGTCGCCGAGTACGCCGCGGGCCGCACCCCCAACCCGTGCATGCGCTGCAACGAGCGCATCAAGTTCGCCGCCCTCCTCGAGAAGGCGCTCGCGCTCGGCTTCGACGCCGTCGTCACGGGCCACTACGCGAGCATCGTCGAGGATGCCCGCGGCAACCGCGAGCTGCACAGGGCGTCGGCCTGGGCCAAGGACCAGAGCTACGTGCTCGGCGTCCTCACGGCGGAGCAGCTCGCCCACGCGATGTTCCCCCTCGGCGCCACGCCGTCCAAGGCCGACGTGCGGGCCGAGGCTGCCGCGCGCGGGTTCAGCGTCGCGTCGAAGCCGGACTCCCACGACATCTGCTTCATCCCCGACGGCGACACCCGCGGCTGGCTCGCGGATCGCGTGGGGGCGGAGCGCGGCGACATCCTCGACACCTCGGGTGCCGTGCTCGGCACGCACGAGGGTGCGCTCGCGTTCACGGTCGGGCAGCGCAAGGGCCTCAACGTCGGCTACCCGACGGACGACGGCAAGCCCCGGTTCGTGCTCGAGATCCGTCCCAAGACGAACGAGGTGGTCGTCGGCCCGCGCGAGGCCCTCGCGATCGCGGAGCTCGCCGGCTCGAAATACACGTGGGCGGGCCTGCCGCCCGCCGACGCTTCGGTGCCGTTCGAGTGCGACGTGCAGGTGCGCGCGCACGCCGACCCCGTGCCGGCGGTGGCGTGCGTGCGCGACGGCGAGCTCGTCGTCACGCCGGCGGAGCCGATCGTGGGCCTAGCGCCCGGCCAGACCGCCGTGCTCTACGTGGGCACGCGCGTGCTCGGGCAGTGCACAGTCGACCGCACGGTGAGCGCCGTGACTGTCGGCGCCCCTTCGTAG
PROTEIN sequence
Length: 365
MSGGVDSAVAAARAVDAGHDVVGVHLALSRMPGTLRTGSRGCCTIEDSMDAQRAANLIGIPYYVWDFSARFKEDVVDDFVAEYAAGRTPNPCMRCNERIKFAALLEKALALGFDAVVTGHYASIVEDARGNRELHRASAWAKDQSYVLGVLTAEQLAHAMFPLGATPSKADVRAEAAARGFSVASKPDSHDICFIPDGDTRGWLADRVGAERGDILDTSGAVLGTHEGALAFTVGQRKGLNVGYPTDDGKPRFVLEIRPKTNEVVVGPREALAIAELAGSKYTWAGLPPADASVPFECDVQVRAHADPVPAVACVRDGELVVTPAEPIVGLAPGQTAVLYVGTRVLGQCTVDRTVSAVTVGAPS*