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BSR_Ace_UAPBR_effluent_p_17858_5

Organism: BSR_Ace_UAPBR_effluent_p_Hydrogenophilales_68_7

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 4
Location: comp(3143..6550)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12498290 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 1136.0
  • Bit_score: 2159
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 1132.0
  • Bit_score: 1988
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 1132.0
  • Bit_score: 1988
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3408
ATGTTGTTCTCGCCCGCCTCCCCCTCTCCCCGCCAATCCGGCCTCGCCGGCGCTGCCGACGCGCTGTGGCTGGCCGAACGCGCACGCCACGGCGCACCGCTGGCGGTCGTGTGCGCAAGCGCCTGGGACGCGCAGCGGCTGACCGAGGAAATCCGCTGGTTCGACCCCGCACTGCGGGTCTGCGCGTTTCCGGACTGGGAAACCCTGCCCTACGACAGCTTCTCGCCGCACCCCGACCTGATCTCGGAGCGGCTGGCGACGCTGTACCAGGTGTCGCGCGGCGAGTTCGACGTGCTGGTGGTGGCGCTGACGACCGCGCTGGTGCGGCTGGCCCCGCCCGCCTTCCTTGCCGCCCACACCTTCTTCCTCAGGCAGAAGACGCGCCTCGACGAGGCCGCCTTCCGGACGCAGATGACGCTGGGCGGCTACAGCCACGTCAACCAGGTCTACGCGCCGGGCGAATTCTCCATCCGCGGCGGGCTGATCGATCTCTTTCCGATGGGCAGCGCCCTGCCCTATCGCATCGACCTCTTCGACGACGAGATCGAGACGCTGCGCGCCTTCGACGTGGACAGCCAGCGCAGCCTCTACCCGGTGCCGGAGATTCGCCTGCTGCCGGCGCGCGAATTCCCGCTCGACGAGGCCGGCGTCACGCGCTTCCGGCAGAATTTCCGCGAGCGCTTCGAGGGCGATCCGTCCAAATCGAAGCTCTACAAGGACGTGAGCAACGGGCTTGCGCCGGCCGGCATCGAGTACGCCCTGCCGCTGTTCTTCGAGACGACCGCGACACTGTTCGACTACCTGCCCGCCTCGGCCACGCTGGCGCTGCACGGCGCACTCGACGAGGCCGGGCAGGCCTTCTGGGCCGACGCGCAGGGCCGTCACCGCCTGCTGTCCGGCGACCGCGACCGCCCCCTGCTGGCGCCGGCCGAGCTGTTTCTGCCGGTCGACGATTTCTTCGTGCGCGCCAAGGGCTGGCCGCAACTGCATCTGGCGCAGGCGGGCGCAGGCCCGGCGCAACCGGTGCCGCCGATCTCAGTCGACCGTCGCGAGGCGCATCCGGTCGCCCGGCTCGCCGCCTTCGCCGAGGGCTTTGCCGGCCGCGTGCTGATCGTCGCGCCCTCGGCCGGACGCCGCGACACCCTCCACGAATACCTCGCCGAGCATGGTCTCGACGCGGTTCCGTGCGAGGGCTGGGCCGGCTGCCGCGACGCGGCTGCGCGGCTGCTGCTGGCGCACGGTCCGCTGGCGGAAGGCTTCGTCGCCGCCGACGCCGGTCTGGCCGTCGTCACCGAGACCGAGCTGTACGCCATCCCGCCGAAGACGCGGCGCGCCCGCGAGGCACGCGCCACGCAGATCGACAACCTGCTGCGCGATCTGTCCGAACTGAAACCGGGCGATCCGGTGGTGCACGCGCAATACGGCGTCGGCCAGTACCTCGGCCTCGTCAGCATGGATCTGGGCGACGGCGACACCGAATTCCTCAAGCTCGAATACGCCCGCGGCGATACGCTCTACGTGCCGGTCGCCAACCTGCACCTGATCTCGCGCTACAGCGGCGCGGGCGAAGGCGAGGCGCCGCTGCACCGGCTGGGCACCGACCAGTGGGAGAAGGCGCGCCGGCGCGCCATGCAGGCGGCGCGCGACACCGCCGCCGAACTCCTGAACCTGTACGCGCTGCGCGCCGCCCGCGAAGGCCACGCGTTCAAGTTCTCGCCGCACGACTACGAGGCCTTCGCCGAAGGCTTCGGCTACGAGGAAACGCCCGATCAGGCCGCCGCGATCGCCGCCGTCATGGCCGACATGCAGTCCGGCAAGCCGATGGACCGGCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAAGTCGCCCTGCGCGCCGCCTTCATGGCGGTGATGGGCGGCTATCAGGTCGCGGTGCTGGTGCCGACCACGCTGCTCGCCGAACAGCATTTCAACAATTTCTCCGACCGCTTTTCGCAATGGCCGGTGAAACTCGCCGAACTGTCGCGCTTCCGCACCGCCAAGGAACAGGCGGCGGCGCTCGAAGCCCTGAAGGACGGCAAGCTCGACATCGTCATCGGCACCCACCGGCTGATCCAGAAGGACGTGAAATTCGCCCGCCTCGGCCTCGTCATCCTCGACGAGGAACACCGCTTCGGCGTGCGCCAGAAGGAACAGTTGAAGGCCTTGCGCGCCGAAGTGGACGTGCTGACGCTGACCGCGACGCCGATTCCGCGCACGCTGGCGATGTCGCTCGAAGGCATCCGCGATTTCTCGGTGATCGCCACCGCGCCGCAGAAACGGCTGGCGGTGAAAACCTTCGTCCAGCCTTTTTCCGGCGGCCTGATCCGCGAAGCCGTGCTGCGCGAGCTGAAGCGCGGCGGTCAGGTCTACTTCCTGCACAACGAGGTCAGCACGATCGAGTCGATGCGCGAGCGGCTGGAAAAACTGCTGCCCGAGGCGCGCATCCGCGTCGGCCACGGCCAGATGGGCGAGCGCGAGCTGGAACAGGTGATGCGCGACTTCTACCAGCAGCGCTACGACATCCTGCTGTGCACCACCATCATCGAAACCGGCATCGACATCCCGACCGCGAACACCATCCTCATCAACCGCGCCGACAAGTTCGGGCTGGCGCAACTGCACCAGTTGCGCGGCCGCGTCGGCCGCTCGCACCACCAGGCCTTCGCCTACCTGCTGGTGGACGAGGACAGAAACCTAACACCACAGGCGAAGAAACGTCTGGAAGCCATTCAATTGATGGAGGAACTGGGTTCCGGATTCCACCTCGCCATGCACGATCTTGAAATCCGCGGCGCGGGCGAAGTGCTGGGCGACAAGCAGAGCGGCGAAATCCTCGAAGTCGGCTTCTCGCTCTACAACGAGATGCTCGCGGGTGCCGTCGCCAGCCTCAGGGCCGGCAAGGAACCGGACATGAGCCAGCCGCTCGGCGTGGTCTCCGAGATCAACCTGCACCTGCCGGCGCTGCTGCCGGACGACTACTGCCCGGACGTGCACGAGCGCCTGGTGCTCTACAAGCGGCTGGCGACCTGCGCCGCGCCGGACGATTTGACGGCGATGCAGGAGGAACTGGTCGACCGTTTCGGCGAACTGCCCGACCCGGCCCGCGCGCTGCTCGCGGTGCACCGCCTGCGCATGGCCACGCGCGCCTACGGCATCGTCAAGCTCGACGCATCCGGCGACGGCCTGAGCGTGCAGTTCGTGCCCAGACCGCCCGTCGATCCGGGTAGAATCCTGCACTTGATCCAGGGCAAGGCCGGCTACCGCCTCGCCGGCCCCGACCGGCTGCGCCTGACGACGCCGCTGCCCGATCTGGCCCGGCGGCTGGGCGCGGTCAACGCCTTCCTCGCCGCCCTGGGCGACCCCCTTCCATCCGCTGCCTGA
PROTEIN sequence
Length: 1136
MLFSPASPSPRQSGLAGAADALWLAERARHGAPLAVVCASAWDAQRLTEEIRWFDPALRVCAFPDWETLPYDSFSPHPDLISERLATLYQVSRGEFDVLVVALTTALVRLAPPAFLAAHTFFLRQKTRLDEAAFRTQMTLGGYSHVNQVYAPGEFSIRGGLIDLFPMGSALPYRIDLFDDEIETLRAFDVDSQRSLYPVPEIRLLPAREFPLDEAGVTRFRQNFRERFEGDPSKSKLYKDVSNGLAPAGIEYALPLFFETTATLFDYLPASATLALHGALDEAGQAFWADAQGRHRLLSGDRDRPLLAPAELFLPVDDFFVRAKGWPQLHLAQAGAGPAQPVPPISVDRREAHPVARLAAFAEGFAGRVLIVAPSAGRRDTLHEYLAEHGLDAVPCEGWAGCRDAAARLLLAHGPLAEGFVAADAGLAVVTETELYAIPPKTRRAREARATQIDNLLRDLSELKPGDPVVHAQYGVGQYLGLVSMDLGDGDTEFLKLEYARGDTLYVPVANLHLISRYSGAGEGEAPLHRLGTDQWEKARRRAMQAARDTAAELLNLYALRAAREGHAFKFSPHDYEAFAEGFGYEETPDQAAAIAAVMADMQSGKPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLLAEQHFNNFSDRFSQWPVKLAELSRFRTAKEQAAALEALKDGKLDIVIGTHRLIQKDVKFARLGLVILDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPRTLAMSLEGIRDFSVIATAPQKRLAVKTFVQPFSGGLIREAVLRELKRGGQVYFLHNEVSTIESMRERLEKLLPEARIRVGHGQMGERELEQVMRDFYQQRYDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAFAYLLVDEDRNLTPQAKKRLEAIQLMEELGSGFHLAMHDLEIRGAGEVLGDKQSGEILEVGFSLYNEMLAGAVASLRAGKEPDMSQPLGVVSEINLHLPALLPDDYCPDVHERLVLYKRLATCAAPDDLTAMQEELVDRFGELPDPARALLAVHRLRMATRAYGIVKLDASGDGLSVQFVPRPPVDPGRILHLIQGKAGYRLAGPDRLRLTTPLPDLARRLGAVNAFLAALGDPLPSAA*