ggKbase home page

BSR_inoc_159868_19

Organism: BSR_inoc_Tistrella_mobilis_68_15

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25376..25876)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H8T9_PSEAC similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 164.0
  • Bit_score: 172
  • Evalue 2.40e-40
RNA polymerase sigma70 {ECO:0000313|EMBL:EQM68797.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 164.0
  • Bit_score: 172
  • Evalue 3.30e-40
RNA polymerase ECF-subfamily sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 167.0
  • Bit_score: 164
  • Evalue 1.40e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas alcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
TTGTCGGGATCCACGCTCAAACGGCTGTTCCTGGCACATGGCCGGGAGTTGCAATCCTATCTGACGCGCCGCATGCGGGACGCGGAGACGGCGGCCGACCTGACCCAGGAGACCTTCCTGCGCTATGCCGAACAGGGCGCAGAGGTCACCGATGGCCGTGCCTGGCTTTACCGCACCGCCCGCAATCTGATGATCGACCACCAGCGGGCCGGGCTGCGCCGGCGCACCCGGCCGCTGCCCCCCGACGAACTCGCCCGCCTGCCGGAAGACCGGCCCGGCGCCGACCGCGAGACCGACGGCCGGCGGACGCTGGACCGGATGCACCGGGTGGTCGAGGGCCTGCCGCCGCGCACGCGCGAGATCTTCCGCCTCAACCGGATCGAGGGATTGAGCTATGCCGATGTCGCCCGACGGCTGGACATCTCGGAAAGCTCGGTGCAGAAGCATCTGGCAAAGGCGCTGGCGGTGATCATGCGCGAGGTGAGACCCGAGGATGTCTGA
PROTEIN sequence
Length: 167
LSGSTLKRLFLAHGRELQSYLTRRMRDAETAADLTQETFLRYAEQGAEVTDGRAWLYRTARNLMIDHQRAGLRRRTRPLPPDELARLPEDRPGADRETDGRRTLDRMHRVVEGLPPRTREIFRLNRIEGLSYADVARRLDISESSVQKHLAKALAVIMREVRPEDV*