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BSR_inoc_120977_16

Organism: BSR_inoc_Bacteroidetes_46_9

near complete RP 47 / 55 BSCG 48 / 51 MC: 1 ASCG 13 / 38
Location: comp(13870..15756)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 661.0
  • Bit_score: 741
  • Evalue 5.20e-211
transcription termination factor Rho n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A6008 similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 623.0
  • Bit_score: 711
  • Evalue 4.10e-202
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 647.0
  • Bit_score: 699
  • Evalue 4.60e-199

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1887
ATGCCTCATGGTAAGCCCGAAAAGCAAGAAGATTTCAAAAAAACAAATTTTACATCAATGTACGATATTATCGAATTGAACGGCAAACTGCTGACGGAACTCAAACAAATCGCAAAGGATTTGGACATCAGCAAAACCAACAATCTCAAAAAACAGGATTTGATCTATAAAATTTTGGATCATCAGGCTTTAAATCCTCCCGAAAAAACAGATCGCAAAGGCCGCCCGGAATCATCTGCCGACAATAATGGCAATGGTTTCGATCCACGTAACCATGATCGCAACCGCCGCCGCCGGATCAGTCCGGAACCGGTGAAAGAAAAACTGGCTTCAAGTACCACAGGTGGTCAGCCACCAATTGAAGCCAAAGCTGCTTCTGCAAATGGTGCCGAACAAAAAACAGAAAAAGACGCACCTCAGCAGGAACGTCCATTCCGGCGCGAAAATCAGCAACGAACTGACAAAGATCACAACAAAAATCGATTTGAACGTCGCGACAACCGACAGGCTGCTCCCACGGAAAATAAACCACAACCTGCACCCGAAAGCCGTTCCGGCGACAATCGTCCCACAGATAACCGCCAGGCAGACACGCGTCAAGCAGATAACCGTCAGCCAGACAATCGTCAATCAGAAAATCGTTCCTCAGAAAAGGTATCTTCAGATAATCGTCACACCGACCACATTATTGATCCGGGGAATGCCGATGAAAATTACCAGCCGCAGCGTAGTAGCCAGCAGCGTCATAATAAAAACGTGGCTTCCGAGCTCGATGGTGCTGTAATTACCGAGGGCGTGCTGGAAGTTATTCAGGATGGATATGGTTTTTTGCGCTCGGCTGATTACAACTACCTCAATTCGCCTGATGATATTTACGTTTCACAATCACAGATAAAACTCTTTGGCCTCAAAACCGGCGATACCATCCGTGGCGCCATTCGTCCGCCAAAAGAAGGTGAGAAATATTTCCCGCTGATCAAGGTGGAAGAAATCAATGGCCGCACCCCGGAAGAAGCCCGCGACCGCATCCCATTCGATTTTCTGACGCCGCTTTTCCCGGAGAAGAAATTTAATCTCACCGGACATCCCGGCGAAACAGTTTCTACTCGAATCATTGATATGTTTACGCCCATTGGCAAAGGCCAACGTGGACTGATTGTGGCGCAGCCTAAAACCGGAAAGACCGTTTTGCTTAAGGAGATTGCCAATGCCATCGCATACAACCACCCCGAGGTTTACATGATTGTGCTACTCATCGACGAGCGTCCCGAGGAGGTTACCGACATGGCTCGTAGCGTGAGAGCCGAGGTAATCGCCAGCACCTTTGACGAGCCTGCCGAACGCCACGTAAAAATTGCCAACATCGTTCTTGAAAAAGCCAAACGCCTCACGGAGTGCGGCCACGACGTGGTAATTCTGCTCGACTCCATCACCCGATTGGCGCGTGCCTATAATACCGTGTCGCCAGCTTCGGGTAAAGTATTGTCAGGTGGAGTGGAAGCCAATGCGCTGCACAAACCCAAACGCTTCTTTGGCGCAGCACGTCAAATAGAACATGGCGGATCGCTCACCATTATCTCCACAGCACTTATCGACACAGGATCGAAAATGGACGAGGTGATCTTTGAAGAATTTAAAGGAACCGGCAACATGGAGTTGCAGCTCGATCGCAAGCTCTCCAACAAGCGTATCTATCCATCCATCGACATTGTGGCATCAAGTACCCGCCGTGACGACCTGCTGCTCGACAAGGAAATCCTGCAGCGCATCTGGATCTTACGTAACCATCTGGCCGACATGAACCCGGTGGAAGCTATGGAATTCCTTAAAGACAGGATGCGTTTTACGCAGACAAACGAGGAGTTTTTGATCTCGATGAATAGTTAA
PROTEIN sequence
Length: 629
MPHGKPEKQEDFKKTNFTSMYDIIELNGKLLTELKQIAKDLDISKTNNLKKQDLIYKILDHQALNPPEKTDRKGRPESSADNNGNGFDPRNHDRNRRRRISPEPVKEKLASSTTGGQPPIEAKAASANGAEQKTEKDAPQQERPFRRENQQRTDKDHNKNRFERRDNRQAAPTENKPQPAPESRSGDNRPTDNRQADTRQADNRQPDNRQSENRSSEKVSSDNRHTDHIIDPGNADENYQPQRSSQQRHNKNVASELDGAVITEGVLEVIQDGYGFLRSADYNYLNSPDDIYVSQSQIKLFGLKTGDTIRGAIRPPKEGEKYFPLIKVEEINGRTPEEARDRIPFDFLTPLFPEKKFNLTGHPGETVSTRIIDMFTPIGKGQRGLIVAQPKTGKTVLLKEIANAIAYNHPEVYMIVLLIDERPEEVTDMARSVRAEVIASTFDEPAERHVKIANIVLEKAKRLTECGHDVVILLDSITRLARAYNTVSPASGKVLSGGVEANALHKPKRFFGAARQIEHGGSLTIISTALIDTGSKMDEVIFEEFKGTGNMELQLDRKLSNKRIYPSIDIVASSTRRDDLLLDKEILQRIWILRNHLADMNPVEAMEFLKDRMRFTQTNEEFLISMNS*