ggKbase home page

BSR_inoc_219408_2

Organism: BSR_inoc_Firmicutes_35_7

near complete RP 48 / 55 MC: 4 BSCG 50 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: 1264..2082

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:302.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 273.0
  • Bit_score: 289
  • Evalue 4.00e-75
mutM; Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 274.0
  • Bit_score: 267
  • Evalue 3.30e-69
Formamidopyrimidine-DNA glycosylase n=1 Tax=Clostridium sp. CAG:302 RepID=R6M8G9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 273.0
  • Bit_score: 289
  • Evalue 2.80e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:302 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 819
ATGCCAGAACTACCTGAAGTTGAAACAGTATTAAGAACACTAGAAAAACAGATTAAGAACAAGCAGATCAAAAGAGTTAAGGTTTTGTGGAATAATATAGTAGCTCAGCCAAATATCGATGAATTTAAATCTTTATTGATCGATCAACACTTCCGTGAGTTTGATCGCTTGGGTAAGTACTTAATTTTTAAACTGGATGATCAGATCTTAATCGCACATTTGCGAATGGAAGGTAAGTTTTACCTTGAGTCGATTGATAAGCCAATTAGAAAACATACTCATGTCGTCTTTGAATTAGATAATGGCCAAACACTTAGATATAATGATACTCGTAAGTTTGGTAAGATGTATCTATATAATAAAGATGATAAACTTAAAGCATTAAGCAAAGTTGGACTCGATCCATGGGATAAAAATTTGGATTCATCATATCTTTTTAATAAAATAAAGAATCGTCATATAACCTTAAAACAAATGTTACTTGATCAAAGTATCATAGCAGGAATTGGTAATATTTATGCTGATGAAATTTGTTTTGCTTGTGCAATGTCACCACTTAAAAGAGTTGATACTTTAAACATAGACGATTGTAAGCTTTTAATCGATAACATCCAAGCAATCTTAAGCAAAGCGATAATCGCTGGTGGTACAACGATTAGAAGTTACACTTCATCTTTAGGGATCACAGGGCGCTTCCAACTATCATTAAATGTTCATACAAGAAAAGATCAGCTTTGTTATCGTTGTAACAAAGTGATCATTAAGACAAAGATTAGTGGAAGAGGTACATATTATTGTCCCAATTGTCAAAAGGAGTGA
PROTEIN sequence
Length: 273
MPELPEVETVLRTLEKQIKNKQIKRVKVLWNNIVAQPNIDEFKSLLIDQHFREFDRLGKYLIFKLDDQILIAHLRMEGKFYLESIDKPIRKHTHVVFELDNGQTLRYNDTRKFGKMYLYNKDDKLKALSKVGLDPWDKNLDSSYLFNKIKNRHITLKQMLLDQSIIAGIGNIYADEICFACAMSPLKRVDTLNIDDCKLLIDNIQAILSKAIIAGGTTIRSYTSSLGITGRFQLSLNVHTRKDQLCYRCNKVIIKTKISGRGTYYCPNCQKE*